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Allegedly GI identifiers are going away in June and switching to "accessioned" gb identifiers: https://www.ncbi.nlm.nih.gov/Sitemap/sequenceIDs.html
So ncbi_fetch should require gb's
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Following Dimitri's talk in the Webinar and an upload of an article this morning including a DNA accession number https://www.gbif.org/species/157062880
![image](https://user-images.githubuserconte…
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I've ran the import, in the following order: crossref (I loaded around 96M records, before I had to stop because I ran out of space), HAL and then PMID, and I've got the following exception when runni…
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Converting “/home/daniel/.cache/open-access-media-importer/media/raw/pmc_doi/pone.0042990.s006.mov”, saving into “/home/daniel/.cache/open-access-media-importer/media/refined/pmc_doi/pone.0042990.s006…
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Some articles in PMC do not have DOIs, and a (small) subset thereof is openly licensed (e.g. http://www.ncbi.nlm.nih.gov/pmc/journals/896/ ), so it would be good if the web form would also accept PMC …
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This is difficult to do as it is highly non-trivial to generate XML from LaTeX, but a requirement for Plan S complience:
https://jats.nlm.nih.gov/publishing/
Probably https://github.com/arxiv-v…
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Some publications like PMID32327426 are missing the journal ID stub in the DOI.
ex: https://pubmed.ncbi.nlm.nih.gov/32327426/
Currently listed `doi:"annrheumdis-2020-217658"` when it should be `…
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Dear developer,
When installing Kraken2 with the following command: kraken2-build --standard --threads 24 --db MY_KRAKEN2_DB
I get this error:
unexpected FTP path (new server?) for https://ftp.nc…
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The DTI tutorial is not updated to the latest code. For instance the `cfa = dtifit.color_fa` should appear. Also, linearity, planarity and sphericity are not exposed in the tutorial. I think people ar…
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Author Name: **Joel Martin** (Joel Martin)
Original Redmine Issue: 2908, https://redmine.open-bio.org/issues/2908
Original Date: 2009-09-01
Original Assignee: Bioperl Guts
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ecoli.nt is no lo…