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Cadd version 1.7 has been [released](https://github.com/kircherlab/CADD-scripts/tree/v1.7). Among other update the scoring now also uses information from protein language models. See paper [here](http…
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I installed cd-hit-auxtools via a conda. However, when I run cd-hit-dup, I get an issue for Segmentation fault (core dumped). I have seen in previous issues #27 and #97 users had issues with segment…
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Hi,
I have a local Singularity mirror file named qc.sif. I did not find any examples of configuring the local .sif file into the cromwell.example.conf file in the documentation you gave me. I che…
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**Snakemake version** : 7.8.5
Consider the following rule:
```
rule all:
output: touch(f"ran_model")
singularity: "/scratch/ag/singularity_images/cuda11.3.0-cudnn8-devel-ubuntu20.04…
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I am being unable to use docker. Even a simple pull gives an error:
axs34-ttl03@dgj223:~/magenta$ docker pull tensorflow/magenta
Using default tag: latest
Warning: failed to get default registry…
ghost updated
6 years ago
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Ubuntu 22.04
CUDA 11.8
AF 2.3
Dear developers,
When running the following command, I get the following errors:
sudo singularity build tcrmodel2.sif singularity/tcrmodel2_singularity.def
…
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Docker or Singularity images could be useful to preserve a specific software version with its run-time environment for long-term archival and reproducibility in scientific computing.
[Docker Hub ma…
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Hi all;
I'm running into an issue when running GATK Spark based tools inside of Docker containers. Spark tries to look up the current username as part of initialization:
https://github.com/jacekla…
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### description
CRAB team manages many jobs in Jenkins. In order to better keep track of the changes, we want to move the scripts executed by jenkins into dmwm/CRABServer.
#### (in progress) Mov…
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Soma-workflow servers can run inside a container (singularity, docker). However if it runs using a local scheduler, it cannot use an installed DRMS on the server submitting machine, because it cannot …