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I tried to run `mmseqs easy-linclust` on the MERC dataset (from http://gwdu111.gwdg.de/~compbiol/plass/2018_08/) but got a segmentation fault.
## Expected Behavior
Normal output of `mmseqs easy-li…
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Please provide as much information as you can:
* **GO term ID and Label**
homoserine biosynthetic process GO:0009090
* **Reason for deprecation** Put an x in the appropriate box:
- [x ] ~…
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The response of the SuperSearch List API down_seq includes the glycosylation site seq when it is at the end. It should not show any amino acids/blank
API query: {
"id": "3b8199f848bc1d021fe3df8ad6…
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Quantitative Behavior of Mass Spectrometers
To apply the theory we learnt in the last chapters of this unit to quantitative analyses with mass spectrometers, we need to think about the limitations th…
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**Describe the issue**
We tried to plot "MUC3A" in lollipop plot. The length of the actual protein is 3323 according to uniprot database. But it is only showing 876.
**Command**
```r
lollipo…
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Currently we allow all IUPAC ambiguity codes for VRS, but no parallel mechanism for amino acids.
Section 1.4.1 of v4.2 of the VCF specification under Ref and Alt, only A, C, G, T, and N (or * for a…
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**- Upload your log file**
[log_2024-07-16_15-27-36.txt](https://github.com/user-attachments/files/16249858/log_2024-07-16_15-27-36.txt)
**- Describe the issue or question:**
Dear Fengchao,
Whe…
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Dear Lirong:
Thank your representative work, I appreciate the analysis of Figure 5 and have some questions regarding its details.
1. For Figure 5(a), the center of the clustering is the codebook. …
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The package has turned out quite clean with nice abstractions. The ideas from earlier versions have been distilled to an elegant set of types and functions, with some new additions.
The elephant in t…
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We have auto-generated content, including uniprot IDs, papers (dois?), etc.
Need:
- somewhere to put it
- somewhere to populate it
- clear links from landing page
Might use Discourse, or po…