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Example: https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl/blob/master/tools/trimmomatic.cwl#L11
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Running iprscan-5.3.46.0 encounters the following error:
```
[alces@login1(Sonny) ~]$ bash -e -l iprscan.sh
‘/opt/gridware/depots/349e6902/el7/pkg/apps/iprscan/5.3.46.0/gcc-4.8.5/test/test_prote…
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Thus preventing use of the `?` shortcut for optionality, and reducing re-use
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I've been able to get all of the dependencies and databases setup so far except for the repeats database.
When I run `funannotate setup -d /Users/b8a/Bioinfotools/Databases -i repeats --update`
…
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Processing a funannotate annotate on an existing genbank genome
https://www.ncbi.nlm.nih.gov/genome/?term=txid245562[Organism:exp]
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/075/GCA_0015…
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Dear Jon,
After I succeed in run sample data, I still failed run my assembly.
When I followed the tutorial to run
`funannotate train -i xenia.contigs.fasta -o fun -s ../../../transcriptome_based_…
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Running the following with a missing `clime` column in the csv, causes nextflow to hang until given C-c twice.
```groovy
// Parse species.txt
Channel
.fromPath("$params.input/species.txt")
…
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Hi,
I'm having this problem with some files:
30/05/2017 09:40:11:480 Welcome to InterProScan-5.24-63.0
30/05/2017 09:40:20:600 Running InterProScan v5 in STANDALONE mode... on Linux
30/05/2017 0…
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Implementar um painel de resultados para o GO na página de resultados de um gene:
Biological Process: protein phosphorylation (GO:0006468)
Molecular Function: protein kinase activity (GO:0004672),…
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Every analysis that requires custom fields needs a subtype.
https://github.com/tripal/tripal/issues/224