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Dear developer,
Many thanks for the great tool! Very handy.
I'll be grateful for your assistance with the issue below.
I updated my rstudio to the latest version and R to 4.2 and now not able t…
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when running NormalizaData() using the same data, v4 would finish it soon but v5 will keep running and never stop(at least 10 hours).
the v4 session is like:
'''
R version 4.3.1 (2023-06-16)
Pla…
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Hi,
`derfinderPlot::plotCluster()` is currently failing https://bioconductor.org/checkResults/release/bioc-LATEST/derfinderPlot/nebbiolo2-buildsrc.html and I traced it back to `ggbio`. Here's a sma…
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Hi there,
I get an error with get_progeny and setting organism = 'mouse':
net
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Recently ran into an issue with the RunUMAP step of the [introductory vignette](https://satijalab.org/seurat/articles/pbmc3k_tutorial). When I execute "pbmc
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Hi Jacques,
Thanks for creating this great package. There seems to be an issue visualizing loops on a matrix when trying to combine the loops and maxDistance arguments in the plotMatrix function. …
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This only seems to an issue when I try to install MOFA2 within a Docker container (using my local Rstudio installation works fine). Though the Docker container has Bioc v3.16 (devel), whereas my local…
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Currently, Spring and Tween are two completely separate objects in Fusion, and don't share any code between them. However, both are conceptually special cases of a more general 'follower object' - an …
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I tried to reproduce the example in the tutorial but was not able to since I cannot create the `methylation` matrix. Using my data I keep encountering the following message error:
> Error in design…
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When I run 'RunHarmony' for a seurat object, it will return a Warning message:
> Quick-TRANSfer stage steps exceeded maximum (= 6687600)
What is this going? Does this will affect the final resu…