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Are there any parameters that could be tuned on Dorado to get equivalent performance on Guppy? I have been running them on a server with SSD with Tesla V100-16GB GPU and Dorado seems to be 1.5-2.5X s…
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Hi!
Do you have any benchmark for small indels 0-50? For eg. how does it compare to deepvariant?
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I think both @jbird9 and @dhalkam have run into this issue at different points. Currently, `subset_targets()` only filters on one column at a time (though you can filter out multiple strings for that …
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- Day 1, day 1, Introduction to Unix (3 hours, do the class in cocalc, give commandline access to the server already, via mobaxterm for homework and project; need to skim down the tutorials, merge and…
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Anyone up to getting Needleman-Wunsch and Smith-Waterman written in cython? The current all-python versions in pyCogent are super slow and the nwalign package has a severe memory leak issue.
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These terms are needed by our researchers to describe the context that an environmental sample was extracted from:
constructed feature >
**agricultural fairground**: Industrial wastewater is w…
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Thank for the newflow pipeline
I am running
docker build .
getting bellow error
```Sending build context to Docker daemon 5.12kB
Step 1/52 : FROM biocorecrg/centos-perlbrew-pyenv3…
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Hi everybody, I have one question regarding the `Disclaimer` Section in the `pagedown::html_resume`:
* Is it possible to put the Disclaimer on the bottom of the last page?
I have two pages and I…
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Hello, I am trying to replicate Megena modules across different datasets from the same tissue and condition combination. Here is some info and about the datasets and megena results.
1) Sample size …
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Here are the current redux categories:
```
A*01:04N lg A*01:01g
A*01:04N lgx A*01:01
A*01:04N G A*01:01:01G
A*01:04N exon A*01:04:01
A*01:04N W A*01:04:01:01N/A*01:04:01:02…