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Hi,
I am trying to use Palantir for mass cytometry data. I started first to reproduce the example data that you provided, however, I faced this error message:
dm_res = palantir.utils.run_diffusion…
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Hello ! I am updating the issue (and therfore the title) :
it seems that this is the following command line, which at the end, remove the WD_FODs.nii.gz file :
```
TractSeg -i ${PROCESSDIR}/${s}/t…
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Hello Lu Lu,
I came across an article on Medium.com (attached below): The neural network approach to solving inverse problems for physics, and was wonder how I could use DEEPXDE to solve this prob…
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# 🚀 Feature
Add support to read, write, sample and transform 4D images.
# Motivation
It would be convenient to support 4D images out of the box, as tensors of shape (C, S1, S2, S3) wher…
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Hello,
When I run as instructed in the documentation, I get an error `unrecognized arguments: --plot3D metric
`. This is especially confusing because I looked at the code for plot_tractometry_res…
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Trying to write a data descriptor paper about m2g.
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Hi,
I have made both topography and uplift fields that work within my model, however when I make an erodibility field using the same method and try to read using readEroLay I get a `'NoneType' obje…
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Hello @farrellja,
I am trying to run URD on single cell data which is around 50K cells. When I am running buildTree(), I am getting the embedding error :
[1] "Calculating divergence between 47 …
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Just finding this library, and *wow*! I wish I had found this sooner.
Was working on some implementations for edge filtering (see [here](https://arxiv.org/pdf/1701.07336.pdf)) but eventually would…
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Hi,
After reviewing literature on registration of diffusion MRI data, I've realized that registering the tensor image is better, as it allows to use orientational, as well as spatial, information d…