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Hello SunPeng
I could not find the python files 01, 02, 03 for the preparation of .gff and .lens files.
Are they integrated with the Wgdi tool?
Could you please simply give some command examples h…
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To use gsonlist for multi GSEA result, can not use dotplot to draw autofacet picture
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Hi John,
The v1.1.4 release looks really great!! The `run_genespace()` function is working for me up until the final step, "Constructing syntenic pan-gene sets ..." at which point memory usage sta…
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https://mp.weixin.qq.com/s/wV7QDUclhU6gvSybjsE5Lw
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Hi John,
I have everything working fine until the pan-gene sets. I got the following errors with the sample data.
Error in setnames(ogs, c("pgRepID", "ofID")) :
Can't assign 2 names to a 0 c…
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Hi Seurat Team,
I am trying to use Dot plot on my dataset and it seems that I can not get any other vcolors than gradient of greys.
here is my code:
DotPlot(mergetest2.big, features = rev(markers…
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Hi, I have generated a list of genes which I am trying to plot on a DotPlot.
I am grouping by 'cellannotation' and then splitting the graph by 'stage', which refers to the developmental stage of my…
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The info box currently shows the IQR definition as shown in the image below:
Please change the wording of the IQR definition to be as shown in the image below. In the definition of the IQR, I'd p…
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In the webapp output the heatmap of jaccard indexes is not plotted on the same y axis as the dotplot. This removes the labelling and connection between the two plots.
Correct R-studio output:
![graf…
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https://mp.weixin.qq.com/s/CsL2CGdydt6ecrkdhwt0Mw