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Hello CSGHub Team,
I hope this message finds you well. I've been exploring the CSGHub platform and I'm impressed with its capabilities, especially in managing large model assets and datasets. It's …
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Hi Andre,
Is it possible to read in reaction flux directionality? That is, if I have a SAMMI map in which arrows are based on annotation in the json file and I read in reaction fluxes - some positive…
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Hello teammates! @eamutaigwe @Sudhaubc @maira1220
My name is Eve Chen and I'm a second-year M.Sc. student in Bioinformatics at UBC.
My background is in Biology, but I have been dabbling in data…
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Hi @jianhong
I am having an issue with the factorFootprints coding. I can run everything up to this point fine, but when I try to run this through, I get the following error. Our bioinformatics te…
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Hi, thanks for your wonderful tool and it is really helpful to my research!
However, when I plan to extend this method to my own deep adaptation network (DAN) or GCN model, the program always retur…
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Dear JACUSA2 team,
I am a truely new to bioinformatics and have been trying to analyze C-to-T base editing that is mediated APOBEC1 enzyme directly conjugated to protein of interest (POI).
_My…
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Produce a step-by-step help guide to using TeSS.
See DReSA's guides for reference:
- https://dresa.org.au/DReSA-User-Manual.pdf
- http://videos.dresa.org.au/
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https://github.com/yang-dongxu/small_tools_of_bioinformatics/blob/1d8ab6664195bdb6d387b5d772dfd9b01f78339a/bw_summary_bed_bins.py#L82-L93
The chaotic output is caused by line 89:
https://github.co…
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* DOI 2 cff version: 1.0.0
* Python version: 3.7.3
* Operating System: Debian Buster
### Description
I'm trying to build a Debian package from doi2cff. The usage example
doi2cff init h…
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Hello, I read your wonderful work HiC-SGL published in Briefings in Bioinformatics and I have some questions:
1. Whether the inter-chromosome contacts are included when using PCA to obtain the init…