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Hi kallisto team,
Could you point me to the documentation showing steps for running lr-kallisto for long-read bulk RNA-seq?
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(copied from https://github.com/sourmash-bio/sourmash/issues/461#issuecomment-1993390314)
Hi Titus @ctb , I don't know whether I could ask the following questions related to this issue, anyway....
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As a rule, "Finding Aid" should always be the first item listed in the left hand column for each collection. Even if I do not list the name explicitly here, all should have "Finding Aid" at the top.
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As we are evaluating integration methods and testing subsets of datasets, it would be helpful to see the exact breakdown of ScPCA projects and how much of each disease, 10X platform, etc. are included…
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When I run giremi.pl, I will get an error in the *.Rout file. The error message is:
Error in data.frame(..., check.names = FALSE) :
参数值意味着不同的行数: 0, 1
Calls: cbind -> cbind -> data.frame
And here is…
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Hello,
Thanks for building this fantastic tool.
We have generated a MERSCOPE (Merfish, 500 genes) dataset and created a Seurat object from an AnnData object following the steps listed here: http…
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Hi,
Can you please give a suggestion on how to use SEACR with experiments that have spike-in and replicates. What do you recommend as far as normalization with spike-in and how to handle replicates?
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Hi,
I am having issues running infercnv and I have checked and do not not have missing data:
**ERROR:**
Error in smooth.spline(x, mean_p0_table$p0) :
missing or infinite values in inputs ar…
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I'm exploring working with PhyloWGS, and can't quite understand what's going on with the CNV inputs. The docs from the front page say:
cnv_data.txt: Note that if you are running without any CNVs, …
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Hi Owen,
I am analyzing some targeted DamID samples for colleagues. We have 4 pairs of polII Fusion/DamOnly samples from drosophila and would like to compare the binding pattern between them on tar…