-
Hi, I tried searching a file (*.mzML) and got the error below. What is the problem here?
Thanks,
Yishai
```
Will execute 13 commands:
java -jar D:\MSFragger-GUI_v3.0\MSFragger_20170103_v2\MSF…
-
I am currently updating our workflows with OpenMS 2.3 nodes.
Making OpenMS nodes using KNIME SDK and GenericWorkflowNodes by following our github wiki page works quite well.
Here are the remaini…
enetz updated
7 years ago
-
HI,
could anyone please share a instruction for running the MSFragger GUI 3.0
I have installed but could not get the MSFragger.jar file and thus could not run the GUI to test.
THanks,
Trayambak.
-
@hbarsnes & @mvaudel :
I have search my data with SearchGUI and Then converted into PeptideShacker using the following command:
```
java -cp /Users/yperez/IdeaProjects/github-repo/pride-clust…
-
Hi,
We are currently trying to run a file and it is failing and displaying the following errors:
Executing command:
$> C:\Users\DPCF_SuperComp_v2\Desktop\MSFragger\philosopher-source_windows_a…
-
Dear MSFragger-Development Team,
I recently started working with your software and stumbled across a problem which i don't know how to solve:
Whenever i try to run PeptideProphet, the command "mv…
-
Hi
a simple question that i cant find an answer for it
How can i export the full peptide info from the analysis?
thanks
-
In TOPPView it is possible to put annotations (labels) on individual peaks in a spectrum. Can such annotations be written to/read from mzML files? (In my tests using right click -> "Save" -> "Visible …
-
This is a follow up from #235, that deals specifically with identification data filtering. Default filtering will do the following:
- keep only rank 1 peptides
- remove decoy hits
- keep only uniqu…
-
Hi together,
I am using MS-GF+ on a regular basis, but lately I have encountered a problem when converting large mzid files (4.2GB) to tsv with the provided converter. I am using version 2017/01/27…
JB-MS updated
6 years ago