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### Project short name:
CD34LineageMyocardialDu ~~Li-Human-10x3pv3~~
### Primary Wrangler:
Arsenios
### Secondary Wrangler:
Ida
### Associated files
* Google Drive: [folder](https://drive.googl…
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Hi everyone, I am using ArchR to integrate scATAC-seq data with scRNA-seq(using addGeneIntegrationMatrix function), and I got these errors below. I have tried many possible solutions but failed, inclu…
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I am currently using proteomics data to study sepsis. I'm not sure if this software can be used to study the development stages of various diseases other than tumors. I would appreciate some suggestio…
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Hello,
Thank you for developing this nice tool.
I have single-cell RNA sequencing (scRNA-seq) data from tissues generated by crossing two distinct mouse strains. I am aware of the single nucleotide …
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hello,
I am trying to create a cell-type signature matrix from bulkRNAseq of FACS sorted mono-cell-types samples:
```
expr_matrix %>% head()
```
| Sample_1 | Sample_2 | Sample_3 | Sample_…
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Dear Omicverse Team,
First of all, I would like to extend my sincere congratulations on the amazing work you have done with Omicverse. It has been incredibly helpful for my research, and I apprecia…
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Hi,
As mentioned in the readme, I used thehuman skin scRNA-seq data and the human skin ST 10X Visium data, and then I get the same dimplot image.
![fig1](https://github.com/user-attachments/assets/…
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10x atac-seq data does not have UMI. Souporcell gives:
```
Traceback (most recent call last): File "/opt/souporcell/souporcell_pipeline.py", line 104, in assert float(num_umi) / float(num_read_te…
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Hi!
Just wanted to quickly confirm if sc.dat is "The cell-by-gene raw count matrix of bulk RNA-seq expression. rownames are bulk cell IDs,
while colnames are gene names/IDs." as mentioned in the t…
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So far there's a demo for training on test set, but not for using a trained model on new data.