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As I mentioned in my other issue, I would like to combine multiple atac files. I am following this tutorial:
`https://satijalab.org/signac/articles/merging.html`
I have 5 atac files, and I only …
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Hello,
I understand enough about the bgzf format that after obtaining the block offset and line offset (pardon if my terminology is slightly off), the pointer jumps to the position on disk where the …
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I would like to combine multiple atac files. I am following this tutorial:
https://satijalab.org/signac/articles/merging.html
I have 5 atac files, and I only get this error for one of them:
`…
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I want to merge my post processor to packer core, please check does it possible:
my code lives in https://github.com/vtolstov/packer-post-processor-compress
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When edges are missing in sparse networks, if they are looked up via `seidr index` and `seidr view` they will access not properly initialized memory.
```
> seidr view -n Q0255:Q0143 svm.sf
Q0143 …
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Hello,
I am trying to create a blobplot using a PacBio assembly of an insect genome. Here is the code I am using:
```
~/blobtools/blobtools create -i ~/Desktop/M-persicae-canu-consensus-2.fasta…
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Hello kriemo,
Thank you for developing so nice software: `scrna-subsets`.
I have already installed the software. What is the command?
Thank you in advance for your great help!
Best,
Yue…
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This pipeline can be very slow for large bam files, which may contain many duplicate reads, reads that align to exactly the same position in the genome and thus likely have the same sequence.
Samba…
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Hi Jesse,
What about xatlas' memory usage?
I just run it with my WES data (average coverage depth of 30x) and xatlas consumed 180G memory (RES) and 318G (VIRT) before I kill it. The log shows it'…
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Hi all,
I'm currently exploring possibilities of bgzip'ed FASTQ files and noticed that FASTQ entries might get split somewhere in between when the block size is reached.
Would it be possible to al…