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**Is your feature request related to a problem? Please describe.**
Working with CSV files is inconvenient and harder for new people to learn. I know you can link to a google sheet, but I'd rather not…
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Importing modules or defining functions in regular cells (without the `%%px` magic) are not known in cells where the `%%px` macro is used.
The same is true for the other way around.
To reproduce thi…
skwde updated
1 month ago
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> Maybe I'm missing something, but with `v2024.10.1` it doesn't work for me :( What am I missing here?
>
> ![Image](https://github.com/user-attachments/assets/bfa9be95-92a9-43d8-bee5-6f65e6866281)
> …
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I think we should introduce a standardized “mask” argument to scanpy functions. This would be a boolean array (or reference to a boolean array in `obs`/ `var`) which masks out certain data entries.
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**Required Skills:** C++
**Difficulty:** Hard
At the moment, changes to the movement cost of cells in the openage pathfinder always overwrite the old values. The old values are not saved anywher…
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hello there, I have been trying to find a way to have a periodic boundary where cells would be limited to a box and I finally got to this notebook : PeriodicBoundaryConditions.ipynb
where it uses s…
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The determineNCells function in cache.cpp is currently only designed to work well for large datasets. In cases where the dataset is small too many cells are created for optimal performance. There need…
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Dear Team,
I wanted to express my deepest appreciation for creating such remarkable tools for predicting promoter-enhancer interactions. They have proven to be tremendously helpful!
I have a qui…
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**Describe the bug**
When the cell contents overflow with an icon the icon pushed the contents down a line which is undesirable.
**To Reproduce**
Steps to reproduce the behaviour:
1. Go to h…
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