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Hi Silas,
I was trying out atlas_analyze. So far so good, I have only one error at the second last step in rule convert_nb.
Here is the error line:
```
Building DAG of jobs...
Using shell: /u…
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Hello,
I am trying to make a causal inference study, and I am using the following command:
java -Xmx128G -jar causal-cmd-1.4.1-SNAPSHOT-jar-with-dependencies.jar --data-type continuous --delimit…
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Hi,
We have installed Agnostos-wf and in our first attempt to analyze our metagenomic data we got the error bellow (in bold) after running 'db_creation' workflow
Used command line:
_snakem…
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Hi, @abhijitcbio
When I follow step1 of HiCnv software, I found that `F_GC_MAP.file.sh` script needs `MultiTrackMappability.bw` file. However, only `Mappability` file of human, mouse and some mode…
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This issue will collect all feedback submitted via the feedback form at the end of each tutorial
----
Results have been [aggregated](https://nbviewer.jupyter.org/github/bebatut/galaxy-training-m…
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input sequence -- human transcriptome
```
curl -JLO https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/405/GCF_000001405.40_GRCh38.p14/GCF_000001405.40_GRCh38.p14_rna.fna.gz
```
command run:
…
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I'm getting the following error:
```
[barrnap] This is barrnap 0.9
[barrnap] Written by Torsten Seemann
[barrnap] Obtained from https://github.com/tseemann/barrnap
[barrnap] Detected operating …
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I'm experimenting with `skani` to cluster plasmid/virus genomes at scale (see [here](https://github.com/apcamargo/pyleiden)). To get diagonal values I started using `--full-matrix`, but I noticed that…
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Hi,
Could you please help me with this error:
2021/09/07/02:25:24 PM Reading sumstats from provided DataFrame into memory 10000000 SNPs at a time.
2021/09/07/02:26:25 PM Read 9804743 SNPs from …
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I am using bowtie2 to find reads or read pairs that are chimeric, aligning partly to a virus and partly to human. I initially align the data to the virus, trim the virus from the read or pair and then…