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If docker is specified by an optional string, and that string is undefined, Cromwell tries to run that task anyways and fails. It would be nice if the task never ran and reported the missing docker va…
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Apparently, the GO terms in the `org.At.tair.db` Bioconductor package (release 3.10) are outdated.
In this package, there are 27,416 Arabidopsis genes for a total of 4837 GO terms.
```
colum…
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Hello,
I am trying to implement the xblas_gemv similar to xblas_gemm and use it to accelerate a genomics tool. And was hoping to get the code changes reviewed as the test is not working as expected…
ramcn updated
5 years ago
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So far the poor thing is not really tested..
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Hi
I was directed to this repo from the Jul 2019 paper - [Scalable Workflows and Reproducible Data Analysis for Genomics](https://www.ncbi.nlm.nih.gov/pubmed/31278683)
The NextFlow section of t…
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Hi,
I was wondering how/if I can choose EM algorithm or the "simpler" multimapping option that distributes reads evenly across genes when using kb to count reads. And because my experiment was done…
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Hi,
I am trying to install circlator on our HPC cluster. I am trying to use Singularity and convert the docker image, but I ran into an issue that I have been able to reproduce with the docker ima…
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We often find that we like to see the individual QC/other value for a sample in a batch e.g. when we have a trisomy with a borderline value that is matching the fetal fraction. We then have to locate …
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