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## Detailed Description
Mutect2 wf expects the input CRAM and CRAI files have the same basename, however
due to the [issue](https://github.com/icgc-argo/data-processing-utility-tools/issues/93) th…
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- [ ] Jenkins file
- [ ] Docker file
- [ ] Artifactory publish
- [ ] Helm chart/Kubernetes yamls. figure it out.
--- Configurable deploy for per-node deploy
--- Each node has its own config whic…
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Create a index against the new mapping with fake data to develop against:
https://github.com/icgc-argo/argo-metadata-schemas/issues/41
- `release_stage` should have the values from here: https://…
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https://github.com/icgc-argo/dna-seq-processing-wfs/issues/49
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Here is the release: https://github.com/icgc-argo/nextflow-data-processing-utility-tools/releases/tag/2.0.0
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- [x] Snapshot `file-centric-1.0`
- [x] Re-index all of song in staging
- [x] Get number issue in arranger solved.
- [x] complete QC and suppression of analysis if needed (For Release, QC steps/pro…
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We can at least add a` ` tag for each page. If there's anything else that can be done with metadata, keywords etc - that would be nice.
For example - the docs site does a better job at showing what…
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## Detailed Description
Example: Aggregations over 10,000 do not count accurately
![image](https://user-images.githubusercontent.com/15824252/94441069-4e816580-0170-11eb-9aad-b8006bcafd34.png)
## P…
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Here is the release: https://github.com/icgc-argo/nextflow-data-processing-utility-tools/releases/tag/2.0.0
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- This ticket can be closed when a wiki is drafted that runs through the validated steps for backing up and restoring each service (backups have bene documented, add the restore process to this):
- [x…