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Please follow **all the steps** described at https://mixomics-users.discourse.group/t/reproducible-example-to-clarify-issues/470 and next fill in the items below:
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🐞 **Describe…
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Hi first of all thanks for this great tool!
I am trying to read my .maf file but I want classify all the mutations as non-silent because I need all for oncoplot and I want to see the mutations if t…
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We have two arms of dataset curation. One is to use existing Synapse resources like manifest.csv and/or Wikis and/or tables to create dataset metadata; let's call this the internal arm. The other is t…
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Installed gdsctools.0.17.0 on a virtual linux machine with python.2.7.0 compatible git and pip.
I am trying to run commands as stated in the GDSCTools 0.17.0 documentation (http://gdsctools/readthed…
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The query below gives results when posted directly to the Multiomics Big GIM I KP (containing gene-gene expression correlation relations) TRAPI endpoint: https://api.bte.ncats.io/v1/smartapi/520851943…
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```
curl 'http://localhost:8082/api/column-store/genomic-data-bin-counts/fetch?dataBinMethod=STATIC' -H 'accept: application/json, text/plain, */*' -H 'accept-language: en-US,en;q…
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Thank you for the fantastic work!
This method seems promising and I'd love to try it out; however, I am not sure how to normalize the data from RNASeq.
What was the source of the BRCA data and h…
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Test Link: https://testing-viewer.canceridc.dev/slim/studies/2.25.196877316647058549027120300438839406015/series/1.3.6.1.4.1.5962.99.1.3144471409.451958541.1639527043953.2.0
Click the Slim image an…
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fetch("https://genie-public-beta1.cbioportal.org/api/column-store/filtered-samples/fetch?", {
"headers": {
"accept": "*/*",
"accept-language": "en-US,en;q=0.9",
"cache-control": "no-cach…
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Hi thank you for bringing this very interesting tool/framework in bridging TCGA and DepMap data to the community!
Can I get your help in better understanding the consideration/rational of including…