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I was doing a periodic sanity check to ensure that all sequence-specific DNA binding transcription factors have both a transcription factor, and a DNA binding MF term.
I found this oddity. It does…
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Most miRNA can be written with `g(HGNC:YFG) transcribedTo m(HGNC:YFG)` so the inference of the central dogma should also make these edges.
I'm also curious about miRNA's themselves, since there's …
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Add taxon constraints for cases where the taxonomic group is cited in the term name e.g. bacterial degradosome, plant-type vacuole, nematode larval development.
Reported by: jl242
Original Ticket: […
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Minimal metadata required for OBI terms:
http://obi-ontology.org/page/OBI\_Minimal\_metadata
For OBI release, the 'has curation status' should be at least 'metadata incomplete'. Not clear about cu…
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I'd like to suggest that we obsolete this term, or merge into its parent.
GO:0001214 RNA polymerase II transcriptional repressor activity, metal ion regulated core promoter proximal region sequence-s…
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Hi !
Running locally `coverage run --source=isatools setup.py test` fails on one test with the following error message:
```
======================================================================
FA…
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check consistent function terms used for transcription associated complexes
mediator
- [x] TFIID
- [x] TFIIIC
- [x] CCAAT-binding factor complex
- [x] TFIIF
- [x] TFIIIA
- [x] TFIIH
Original comment …
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Related to #1216
It looks like dataframe/dataset api has, or will have, some built in support for sorted join operations:
https://issues.apache.org/jira/browse/SPARK-12394
Needs further investigati…
jpdna updated
7 years ago
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/InesdeSantiago/BaalChIP
Confirm the following by editin…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/yourusername/yourpackagename
Confirm the following by e…