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https://www.biorxiv.org/content/early/2018/04/12/300061
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Need to curate some alternative transcript examples for Chado loading
can do some from the gene expression list:
gene expression, alternative splicing (3)
gene expression, alternative transcri…
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After many single-step process obsoletions this branch is more organized:
mRNA polyadenylation children have now all been rehoused or obsoleted (this will go in the next week or so)
Next ta…
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content negotiation on my landing page redirects me to rdf.dydra.com... Seems that the certs are invalid:
$ curl -L -v -H "Accept: text/turtle" https://rdf.dydra.com/markw/polyadenylation-sites-in…
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I'm happy to do this myself but would prefer to delegate if at all possible. Looking at the [commit graph](https://github.com/Benjamin-Lee/deep-rules/graphs/contributors?from=2018-09-29&to=2020-06-04&…
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Hello,
While comparing my genome alignments and transcript model, I have found out that IsoQuant 3.2.0 incorrectly assigns transcript model to annotated transcript if only 3′ end site differs.
O…
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Dear Team,
I run Whippet on my paired-end, unstranded, polyA+ RNA-seq dataset. The dataset is of 75bp length (all reads in all samples have this length) and performed in triplicates per condition (…
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I've seen a few issues posted here that describe lots of alternative first and alternative last events. These could simply be due to a noisy reference gtf. SUPPA makes it easy to limit this issue by d…
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Do you recommend any tool to annotate 5'UTR, CDS, 3UTR features in the isoforms generated from `FLAIR`
akk01 updated
2 years ago
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Hi
Will nanotail be able to support tailfindr output files ?
Kind Regards