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This issue is related to https://github.com/WireCell/wire-cell-toolkit/issues/322, where we convert "planeID" to "layerID" for PDHD APA1 inside OmnibusSigProc.
This trick works perfectly for the e…
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Hi! This is part of the error message I receive. Could you kindly advise me how to interpret this? Many thanks
Image Exception : #63 :: No image files match: /mounts/auto/p2108glia/VBG_output/outpu…
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## Expected Behavior
4.4.1 does not allow a user to select a ROI when clicking a location.
## Current Behavior
ROI at location is missing
## Steps to Reproduce:
1. Get airborne
2. Set mode t…
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Should be able to select an ROI and have the histogram and color/opacity functions updated to match the distribution of data within that ROI.
Thanks to Steve Pieper for the suggestion.
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I have successfully run this script to conduct tissue segmentation on t2w fetal MRI scans but I'm not sure how to extract ROI values for each image. Is there a label file or look up table for the .nii…
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`read_dicom_auto` can return any one of `(Scan | PET | StructureSet | Dose | Segmentation | None)`
for `baseImage` I'm assuming it should must return a `Scan` type?
reason:
the …
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When I was working on my plant phenotyping Capstone project for MarsFarm, when I was trying to calculate rois automatically for a diverse set of images I developed a program to automatically calculate…
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##### System information (version)
- OpenCV => 3.3:
- Operating System / Platform => Ubuntu16.04 Linux 4.10.0-42-generic x86_64
- Compiler => codeblocks 13.12
##### Detailed description
In CU…
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Working with @ambarb on this and was difficult to determine parameters to fit the rings and find the center on a stack of different images in a reliable and fast way.
Was suggested to use Hough Tr…
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⚠️ -- beware of interaction with #237
To combat the problem of proximal regional spots that should be retained being used as 2 separate ROIs rather than 1, we can merge the ROIs after the detecti…