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I have a stupid question to ask, about this sentence "**_In the paper we define a hotspot as a residue on the target protein which is within 10A Cbeta distance of the binder_**".
I am working on se…
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![Image](https://github.com/BuddhaNexus/buddhanexus/assets/49606945/f348ac84-4ef0-476e-ba3e-716b151c43bf)
All the sites are mentioned at the bottom of the menu and not just the ones that are releva…
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All CLTK corpora text repos need a converter.py and the subsequent converted cltk_json dir with json files that are produced by converter.py.
One example of a converter.py is here: https://github.…
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T10n0305
``` xml
「〔文殊師利…諸佛如來〕一千百十五字-【三】【宮】(文殊師利…諸佛如來)一千百十六字【大】,〔-〕【宋】【元】【明】【宮】文殊師利!過五十世界微塵數世界微塵大
```
`「`在``外。
类似 https://github.com/cbeta-git/xml-p5a/issues/8#issue-1841094103
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I want to introduce new LJ types . For example, for certain Calpha and Cbeta in my system.
Then, I want to set to zero their INTRAmolecular contibution, but not the INTERmolecular contribution.
I…
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I tried to use your pipeline. in the [Analyzing diffusion outputs] section of 0diffusion, the following error occurs. I tried to use your 7o2g_HBA.pdb with small molecule HBA and it works fine, I don'…
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I read the doc, but still meet some problem. I have 20 cbeta xml(20 diff label, assume 1 to 20), and I wanna make a diff result of them. could you please to provide a 'step-by-step' tutor of this.
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```
PyMOL>delete *
PyMOL>lrp $PATH/model.pdb
Traceback (most recent call last):
File "pymol_utils.py", line 658, in load_rosetta_pdb
import_scores(pdb, object_name=object)
File "pymol_ut…
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##### System information (version)
- OpenCV => 3.4.1
- Operating System / Platform => CentOs & Redhat 7.4 64 Bit
- Compiler => g++ 5.5
- Compilation by Linuxbrew with all default settings
####…
ghost updated
5 years ago
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As discussed on this [PR](https://github.com/sailfishos-chum/bugger/pull/33), it should be better if Bugger! find automatically the latest stable version instead of changing at each release the variab…