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k-means clustering analysis
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When I was performing scVelo analysis, I first divided the single-cell data into main clusters, then extracted a group from the main clusters and further subdivided it into subtypes. However, when I d…
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### Is there an existing issue for this?
- [X] I have searched the existing issues
### Description
GA for AKS cost analysis has been [announced](https://azure.microsoft.com/en-gb/updates/gene…
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* [ ] Cluster analysis should make use of the short range loop for neighbor finding, if the cutoff is short enough
* [ ] add a cutoff() function to the pair criteria, i.e, the maximum distance of …
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Hey, I have an idea to add in more visualisation for better insights like scatter,count,pairplot,heat maps etc , exploratory data analysis and algorithms such as hierarchy clustering,DBSCAN,etc.
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@AidanCox12 See below for what I have from Sal's **matlab** code via an email he shared in 2014 (!). I'm digging up some R stuff that I wrote on this now. If only I had a nice doc on github summarizin…
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Hi I have recently moved to using a new cluster. I am using version: ipyrad [v.0.9.95] on a cluster using 20 cores
ipyrad [v.0.9.95]
Interactive assembly and analysis of RAD-seq data
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**The specific error you're running into**
Warning in initialize(value, ...) :
There must be an even number of elements
Adding a ghost value
This error throws just as "Performing a two sampl…
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the incompatibility checks in the cluster analsys are too broad for Lees Edwards boudnary conditions.
Identifying clusters should work, as far as I understand, just the per-cluster observables such as…