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Love it.
Do you have dragen_sv_merge.py available for interested individuals? Merging SNP datasets with SV datasets has been trickier than I imagined - it would be lovely if you have a solution!
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Hi,
I followed the Illumina DRAGEN on AWS Partner Solution Deployment Guide to deploy DRAGEN, but encountered a error during creating stack(DragenStack-ContainerBuild stage).
Some part of error i…
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Hi TAG,
NCI has contractual, monthly reports in which we provide them a set of metrics. The contracts were created during Picard- so we are now trying to find equivalents of the attached metrics.
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Gives `run_dragen_somatic_step` instead of `workflow.cwl#dragen-somatic-with-germline-pipeline--4.2.4/run_dragen_somatic_step`
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### Which type of feature are you implementing?
- [X] I have selected (at least) one of the following `Label` for the feature
### Is there an existing issue / PR for this?
- [X] I have search…
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`chr19 11207621 Minda_63 N . PASS SVLEN=62;SVTYPE=INS;SUPP_VEC=PB_severus_INV3219,PB_ID_62587_2,PB_Sniffles2.INV.F3M12,ONT_severus_INS14697,ONT_i_171,PB_i_420
`
https://v2.genomeribbon.com/?session=…
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Hi,
While Dragmap is freely available, is the rest of the Dragen software also? Is it possible to download the software that performs the variant calling?
j0ntt updated
5 months ago
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Dragen 4.2 now offers a high-sensitivity mode:
https://developer.illumina.com/news-updates/dragen-4-2-enhanced-machine-learning-new-targeted-callers-and-more
Dragen 4.3 imporves the high-sensitivity …
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`chr10 67470511 Minda_11 N N]chr10:68211499] . PASS SVLEN=740988;SVTYPE=BND;SUPP_VEC=ILL_MantaDUP:TANDEM:170154:0:1:0:0:0,ILL_gridss174bf_4460h,PB_severus_BND783_2,ONT_severus_BND834_2,ILL_2795390560:…
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`chr5 36023180 Minda_112 N . PASS SVLEN=3336845;SVTYPE=DUP;SUPP_VEC=PB_severus_BND5690_2,PB_r_284,ONT_severus_DUP6554,ONT_r_183,ILL_MantaDUP:TANDEM:97365:0:1:0:0:0,ILL_2945609644:2,ILL_gridss91bf_991…