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GdTBioinfo-nf-snvs
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Generate BWA index and Reference Dict when not given as params.
#42
yolandabq
opened
2 days ago
1
Agregar soporte para SpliceAI en el pipeline
#41
nacasfer
opened
1 week ago
0
[FEATURE] <title> Create SpliceAi module
#40
nacasfer
opened
1 week ago
0
modify workflow snvs.nf to take fastq and launch gatk haplotypecaller
#39
yolandabq
closed
1 week ago
2
Pangolin
#38
nacasfer
opened
3 weeks ago
0
Añadido módulo pangolin al flujo de trabajo
#37
nacasfer
closed
3 weeks ago
0
Pangolin
#36
nacasfer
closed
3 weeks ago
0
add automap module
#35
RafaFariasVarona
opened
2 months ago
0
add tabix module
#34
RafaFariasVarona
closed
2 months ago
0
add bgzip module
#33
RafaFariasVarona
closed
2 months ago
0
Importbgzipmodule
#32
RafaFariasVarona
closed
2 months ago
0
add format2info module
#31
RafaFariasVarona
opened
2 months ago
1
[FEATURE] Add TABIX_BGZIP module
#30
yolandabq
opened
2 months ago
0
[FEATURE] Add TABIX_TABIX module
#29
yolandabq
opened
2 months ago
0
added files for gatk variantfiltration module
#28
guriaregojo
opened
2 months ago
0
add vep module from nf-core
#27
RafaFariasVarona
closed
2 months ago
0
added files for gatk selectvariants module
#26
guriaregojo
closed
2 months ago
0
[FEATURE] ComposeSTRTableFile from Dragen
#25
yolandabq
opened
2 months ago
0
Importing sortvcf from nf-core
#24
yolandabq
closed
3 months ago
0
Importing DeepVariant from nf-core
#23
yolandabq
closed
3 months ago
0
Import deepvariant
#22
yolandabq
closed
3 months ago
0
GATK_4
#21
SannikovaNV
closed
4 months ago
0
fastq_align_bwa subworkflow
#20
yolandabq
closed
4 months ago
0
Fastq align bwa
#19
yolandabq
closed
4 months ago
0
Add files via upload
#18
yolandabq
closed
4 months ago
1
[FEATURE] Create AUTOMAP module
#17
yolandabq
opened
6 months ago
1
[FEATURE] Add "FORMAT2INFO" process as module
#16
yolandabq
opened
6 months ago
1
[FEATURE] Import Pangolin module from nf-core
#15
yolandabq
opened
6 months ago
0
[FEATURE] Create annotation subworkflow
#14
yolandabq
opened
6 months ago
0
[FEATURE] Add GLOWgenes annotation
#13
yolandabq
opened
6 months ago
0
[FEATURE] Adapt process PVM to nf-core modules
#12
yolandabq
opened
6 months ago
0
[FEATURE] Create cache for annotation
#11
yolandabq
opened
6 months ago
0
[FEATURE] Add configuration file for ensemblvep
#10
yolandabq
opened
6 months ago
0
[FEATURE] Add ensemblvep
#9
yolandabq
closed
2 months ago
0
[FEATURE] Add gatk SortVcf
#8
yolandabq
closed
3 months ago
0
[FEATURE] Add module Gatk VariantFiltration
#7
yolandabq
opened
7 months ago
0
[FEATURE] Add module Gatk SelectVariants
#6
yolandabq
closed
2 months ago
0
[FEATURE] Add a subworkflow for Variant Calling steps
#5
yolandabq
closed
2 months ago
1
[FEATURE] Add "MERGE_VCF_CALLERS" process as module
#4
yolandabq
opened
7 months ago
0
[FEATURE] Add Haplotypecaller Dragen mode
#3
yolandabq
opened
7 months ago
3
[FEATURE] Add DeepVariant caller
#2
yolandabq
closed
3 months ago
0
[FEATURE] Add GATK Haplotypecaller
#1
yolandabq
closed
4 months ago
0