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What's in this image?
![plate1_1_013](https://github.com/user-attachments/assets/24f0e4d6-72ea-449a-b191-03ddaec3b155)
Source: Heriche et al
License: [CC BY 4.0](https://creativecommons.org/li…
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Collaborators have asked if we could implement a module for performing differential analysis.
After speaking with Dan T., we believe that we can do so in the existing application without bogging t…
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Available expressions analyses finds expressions that have been computed and whose operands have not been redefined, making them available for reuse.
**Direction**: Forward
**Type**: Must Analysis
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Having this type of error on the ANTLR scope is really bad, because it is never able to provide a useful error and many times this breaks parsing of anything below the partial expression. This is a ve…
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Dear developer,
We would like to perform TWAS analysis on a plant population. Our data consists of phenotypes, whole-genome gene expression levels, and genotypes for each sample.
We do not have …
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Dear developer,
We would like to perform TWAS analysis on a plant population. Our data consists of phenotypes, whole-genome gene expression levels, and genotypes for each sample.
We do not have …
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Hi!
First of all, thank you for developing such a useful tool for analyzing Perturb-seq data! I have a question regarding the differential expression analysis in Mixscale. From reviewing the source c…
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Hi,
I have three groups of single-cell samples: A, B, and C. The sequencing depth of group A is significantly higher than that of groups B and C. I am concerned that when I combine all three groups…
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Currently, if a `policy_expr` has a JSON pointer (most all of them do), we can't parse the expression into the structured `Expr` type until the analysis completes and we have the value to insert at sa…
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In https://dart-review.googlesource.com/c/sdk/+/389590, I've added documentation to the `FlowAnalysis` class explaining the assumptions flow analysis makes about the order in which its client visits A…