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Hi!
Thank you for developing this great tool.
Is it possible or are there any plans to add the functionality to generate FASTQ files from the simulated count data?
Thanks in advance,
Braulio…
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Hi
When trying to run the command
`binchicken build --conda-prefix /work/river/Software/miniconda3/envs`
I got this error (the full log is attached [binchicken.log](https://github.com/user-att…
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I'm running Pheniqs with paired end fastq files as input, and creating bam files as output. The first field in the bam file retains the info from the fastq header row (the instrument type, run id, flo…
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Nextflow adopts the scatter-gather method to process huge fastq files. First, split one huge fastq file into multiple smaller fastq files, and then submit jobs that process each individual fastq file …
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### Description of feature
We are currently going through the headache of having to wait for gzip to compress fastq files just to be able to run them in this pipeline. It would have been very nice if…
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Hello. I'm having a problem trying to trim my primers from my interleaved fastq files (R1 and R2 reads have already been merged into each sample file).
I am using Windows Linux Bash Systems, cutada…
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Hi and first, thanks for the great work.
I tried to run Hostile to get the filtered result files and the removed read-pairs (Illumina paired-end data as input). What caught my eye is that the two r…
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I have a large list of fastq files that will be used for the same database.
Is there a simple way to run the command on a list of files for the same Meryl database or do I need to concatenate all o…
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Hi there,
Have been using your library to demultiplex libraries - 384 well illumina libraries per ONT run - which have a similar construction to Tru-seq paired indexes.
The first sets tested w…
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I could not run the sortmerna on my computer, because it does not have enough RAM(my computer has 20G RAM )
ERROR is: Segmentation fault (core dumped).
And I will list the code at the end.
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