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Hi,
I am doing a genomic analysis of bats, and I have WGS for about 13 individuals but with unknown ancestry or relatedness, many from different populations.
I read that DeepVariant is one of the be…
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Hello,
I forked your project and I have been trying to make it work but it is not displaying a typical database. What am I missing? or what could I do to make it work?
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Analysis of simulated validation data by the CARD team (unpublished) revealed that Prodigal undercalls ORFs when the _-split_prodigal_jobs_ option is used. This was particularly noticeable in a _Acine…
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There is a bug when I am trying to run mnm_regression.ipynb, which works well at the end of July. I did not see obvious update in recent modification in that pipeline, could be some updates in pecotmr…
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### Description
For human DNA samples customers can order different analysis workflow but they can also order sequencing only (FASTQ) where we just send them the FASTQ files.
This option does not …
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The use case described in #57 will be used to identify requirements on the interfaces between the VP[^1] and the connected resources, on the data objects that are communicated, and the services that p…
mroos updated
1 month ago
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Hi,
I am currently using methylartist version 1.3.0 for my genomic data analysis. I've encountered an issue where the legend for sample data in the visualizations takes up a substantial amount o…
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### Description of the bug
Hi, I have added path for multiple vcfs inside samplesheet.csv as input to the pipeline and kept `chr` column empty as recommended ("If the target genomic data file conta…
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Hi everyone,
I’m currently working on Xenium (10x Genomics) data analysis, which contains 321 targeted genes. To explore more, I would like to merge and integrate public data with my Xenium dataset…