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When downloading `https://zenodo.org/record/1435834/files/dwpcs_length-2_damping-0.0.zip` from https://zenodo.org/record/1435834, I got:
```python-traceback
python manage.py populate_database --ma…
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In https://github.com/greenelab/hetmech/pull/173, I began touching up some of the rephetio epilepsy predictions for the manuscript. Specifically, I'm most interested in including visualizations from:
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We've now completed computing DWPCs and their corresponding DGP null distributions for all metapaths up to length 3 in Hetionet v1.0. We're working on building a database with this information in http…
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Hi, I followed the steps in the readme and try to connect the front end with the back end. However, though I could open page http://localhost:8000/v1/ I got error when trying to open http://localhost:…
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We had a hetmech conference call today with @bdsullivan @cgreene @zietzm @kkloste and Drew van der Poel. @bdsullivan brought up the possibilities of using other methods than XSwap to create permuted h…
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@gwaygenomics made the following observation:
Importing `hetmech.matrix` without previously importing `hetmech.hetmat` gives an `ImportError`
In the following image, I ran the first cell, then r…
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When feeding paths into the HetMat archiving functions, it would be very helpful if pathlib paths were supported inputs, as opposed to just strings.
```python
all_paths_1 = hetmat.metagraph.extrac…
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We are considering creating another base representation of hetnets. One of the main goals is to facilitate faster network loading, which at present can take over a minute and a half to load a graph.
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Check out the `xarray` package (https://github.com/pydata/xarray) to store hetnets as a multidimensional array.