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Hello,
I was trying to train the models, and I get this error:
```
Traceback (most recent call last):
File "/app/models/train.py", line 4, in
from dataloader import (ApodDataModule, Caid…
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We recently discovered your AI-HDX program on GitHub, and it has proven to be extremely valuable for our research. However, while following the instructions in MSA_embedding.md, we encountered an erro…
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Hi
I am struggling with running RFAA on SLURM compute node. I am able to install it as per recommendations but I dont know if it is normal for hhblists to run for so many hours!
Sun Jul 14 06…
GM-33 updated
1 month ago
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Thank you for your work, but I had some trouble trying to install and use it.
At the end is my error message. I noticed that these two issues are very similar to my error message:
https://github…
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Hey guys
Great work! I am trying to get OpenFold running on our cluster and having problems with hhblits on uniclust30. I adapted the longer paths to just "path" for privacy reasons. Help would be …
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I get a Segmentation fault at hhblits (RaptorX_Property_Fast/Fast_TGT.sh line 120-138), simillar with the problem described at link below:
https://github.com/soedinglab/hh-suite/issues/42
Howev…
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Hello,
I am trying to run the example code to predict protein monomer 7u7w_A and I get the following error
`./SE3nv-20240131.sif -m rf2aa.run_inference --config-name protein
/usr/lib/python3.10/…
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I've tried using the standard alphafold2 setup via docker (converted to a singularity container) via the setup described at https://github.com/kalininalab/alphafold_non_docker, and both result in the …
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Hi!
I am trying to install the dependencies of AGNOSTOS following your instructions here: https://github.com/functional-dark-side/agnostos-wf/blob/master/AGNOSTOS_usage.md
And everything seems to…
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(RFAA1) [2200012187@hr-6-6-login RoseTTAFold-All-Atom]$ python -m rf2aa.run_inference --config-name protein
/gpfs/share/home/2200012187/mambaforge/envs/RFAA1/lib/python3.10/site-packages/hydra/_inter…