issues
search
soedinglab
/
hh-suite
Remote protein homology detection suite.
https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-019-3019-7
GNU General Public License v3.0
513
stars
128
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
addss.pl calls blastpgp and makemat which are legacy blast commands
#374
Beigephage
opened
1 month ago
3
PDB70 errors
#373
bregman3
opened
1 month ago
0
HHblits failed : Unrecognized HMM file format in '468479486'
#372
Madhumitha0206
opened
3 months ago
0
Segmentation Fault Running HHsearch
#371
darylrbarth
opened
3 months ago
0
Pfam36 Update
#370
LicoriceLin
opened
3 months ago
1
Using hh-suites to find E.coli gene in other Proteobacteria <advice on the way I am using the method>
#369
Jigyasa3
opened
4 months ago
0
您好 制作属于自己的蛋白质数据集时出了问题
#368
zj223332
opened
4 months ago
0
Python 3.11 Support
#367
shreyasvinaya
opened
4 months ago
1
Segmentation fault with ffindex_apply -- hhmake
#366
jolienvanhooff
opened
5 months ago
0
HHblits Prefiltering database run time on Supercomputer Cluster
#365
Harryyang21
opened
5 months ago
3
PackagesNotFoundError
#364
BluCp
opened
6 months ago
3
Both HHBlits and HHSearch give misaligned indels for homologous sequences
#363
hrp1000
opened
6 months ago
0
Request to update the PDB70 database
#362
Fabian-Bastiaanssen
opened
7 months ago
3
error while loading shared libraries: libHH_OBJECTS.so
#361
gabrielctn
closed
7 months ago
2
c++: fatal error: Killed signal terminated program cc1plus
#360
YourArka
closed
10 months ago
1
hhmake issue
#359
a30221274
opened
10 months ago
0
hhmake issue
#358
a30221274
closed
10 months ago
0
src/a3m_compress.h: fix build failure with gcc 13
#357
emollier
opened
10 months ago
0
HHblits failed
#356
skhatri007
opened
10 months ago
0
HHsearch - inconsistent results
#355
majnusova
opened
10 months ago
1
Does the template searching result contain query sequence's structure or not?
#354
psp3dcg
opened
11 months ago
3
Does the template searching result contain query sequence's structure or not?
#353
psp3dcg
closed
11 months ago
0
HMM-HMM comparison - beginner
#352
lalalagartija
opened
11 months ago
0
ERROR building database for HHsuite using cstranslate
#351
bioxruan
opened
1 year ago
0
issue using cstranslate
#350
swohlrab
closed
1 year ago
0
some issues while using HH suite
#349
LYM5460lym
opened
1 year ago
0
Author and PDB assigned chain identifiers
#348
ajipalar
opened
1 year ago
1
SIMDe 0.7.4
#347
mr-c
opened
1 year ago
1
Can I use hh_reader.py under a not copyleft license?
#346
seanrjohnson
opened
1 year ago
0
hhalign -all parameter
#345
ToHanwei
opened
1 year ago
0
hhblits job goes to sleep?
#344
BinhongLiu
opened
1 year ago
0
ffindex_order giving many fewer entries in output .ff(data,index} files than in input files
#343
hrp1000
opened
1 year ago
4
error running hhblits on costumized database
#342
idrinnen
closed
1 year ago
1
inconsistency using fragment or whole protein
#341
twaksman001
opened
1 year ago
0
understand HMM-HMM alignment
#340
lalalagartija
opened
1 year ago
0
hit key length truncated to 30 bytes in hhr output files
#339
nandoide
opened
1 year ago
0
Using hhalign to align 2 sequences
#338
trinhhoausc
opened
1 year ago
0
HHblits error "sequences in merged A3M file do not all have the same number of columns,"
#337
ajbordner
opened
1 year ago
4
data meaning of each file of database
#336
SamanFekri
opened
1 year ago
0
Error while using hhalign
#335
ChongLC
opened
1 year ago
2
Name error in a3m, but not in hhr
#334
EileenLLL
opened
1 year ago
0
TIGRFAM is not avalible at hh-suite databases
#333
gucedac
opened
1 year ago
0
Why need to refer a database when I build a customized database?
#332
EileenLLL
opened
1 year ago
2
A question about searching time
#331
YiningWang2
opened
1 year ago
0
Potential database bug on pdb70_from_mmcif_220313.tar.gz, focusing on 6WOV_C
#330
ZiyaoLi
opened
1 year ago
0
ffindex_insert_memory: Bad address
#329
ndmaduro
closed
1 year ago
0
Issue with make & install
#328
ndmaduro
closed
1 year ago
3
Errors from hhsuitedb.py
#327
rcedgar
opened
1 year ago
0
Bring back HMMER3 file format
#326
jamaliki
closed
1 year ago
1
.HMM convert to .HHM
#325
jamaliki
closed
1 year ago
1
Next