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soedinglab
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hh-suite
Remote protein homology detection suite.
https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-019-3019-7
GNU General Public License v3.0
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Issue with make & install
#376
SihuiZhu0927
opened
1 month ago
1
compile issue on gcc13
#375
everburstSun
closed
2 weeks ago
1
addss.pl calls blastpgp and makemat which are legacy blast commands
#374
Beigephage
opened
6 months ago
3
PDB70 errors
#373
bregman3
opened
6 months ago
0
HHblits failed : Unrecognized HMM file format in '468479486'
#372
Madhumitha0206
opened
7 months ago
0
Segmentation Fault Running HHsearch
#371
darylrbarth
opened
8 months ago
0
Pfam36 Update
#370
LicoriceLin
opened
8 months ago
1
Using hh-suites to find E.coli gene in other Proteobacteria <advice on the way I am using the method>
#369
Jigyasa3
opened
9 months ago
0
您好 制作属于自己的蛋白质数据集时出了问题
#368
zj223332
opened
9 months ago
0
Python 3.11 Support
#367
shreyasvinaya
opened
9 months ago
1
Segmentation fault with ffindex_apply -- hhmake
#366
jolienvanhooff
opened
9 months ago
0
HHblits Prefiltering database run time on Supercomputer Cluster
#365
Harryyang21
opened
10 months ago
3
PackagesNotFoundError
#364
BluCp
opened
11 months ago
3
Both HHBlits and HHSearch give misaligned indels for homologous sequences
#363
hrp1000
opened
11 months ago
0
Request to update the PDB70 database
#362
Fabian-Bastiaanssen
opened
12 months ago
4
error while loading shared libraries: libHH_OBJECTS.so
#361
gabrielctn
closed
1 year ago
2
c++: fatal error: Killed signal terminated program cc1plus
#360
YourArka
closed
1 year ago
1
hhmake issue
#359
a30221274
opened
1 year ago
0
hhmake issue
#358
a30221274
closed
1 year ago
0
src/a3m_compress.h: fix build failure with gcc 13
#357
emollier
closed
2 weeks ago
1
HHblits failed
#356
Comp-era
opened
1 year ago
0
HHsearch - inconsistent results
#355
majnusova
opened
1 year ago
1
Does the template searching result contain query sequence's structure or not?
#354
psp3dcg
opened
1 year ago
3
Does the template searching result contain query sequence's structure or not?
#353
psp3dcg
closed
1 year ago
0
HMM-HMM comparison - beginner
#352
lalalagartija
opened
1 year ago
0
ERROR building database for HHsuite using cstranslate
#351
bioxruan
opened
1 year ago
0
issue using cstranslate
#350
swohlrab
closed
1 year ago
0
some issues while using HH suite
#349
LYM5460lym
opened
1 year ago
0
Author and PDB assigned chain identifiers
#348
ajipalar
opened
1 year ago
1
SIMDe 0.7.4
#347
mr-c
opened
1 year ago
1
Can I use hh_reader.py under a not copyleft license?
#346
seanrjohnson
opened
1 year ago
0
hhalign -all parameter
#345
ToHanwei
opened
1 year ago
0
hhblits job goes to sleep?
#344
BinhongLiu
opened
1 year ago
0
ffindex_order giving many fewer entries in output .ff(data,index} files than in input files
#343
hrp1000
opened
1 year ago
4
error running hhblits on costumized database
#342
idrinnen
closed
1 year ago
1
inconsistency using fragment or whole protein
#341
twaksman001
opened
1 year ago
0
understand HMM-HMM alignment
#340
lalalagartija
opened
1 year ago
0
hit key length truncated to 30 bytes in hhr output files
#339
nandoide
opened
1 year ago
0
Using hhalign to align 2 sequences
#338
trinhhoausc
opened
1 year ago
0
HHblits error "sequences in merged A3M file do not all have the same number of columns,"
#337
ajbordner
opened
1 year ago
4
data meaning of each file of database
#336
SamanFekri
opened
1 year ago
0
Error while using hhalign
#335
ChongLC
opened
1 year ago
2
Name error in a3m, but not in hhr
#334
EileenLLL
opened
1 year ago
0
TIGRFAM is not avalible at hh-suite databases
#333
gucedac
opened
1 year ago
0
Why need to refer a database when I build a customized database?
#332
EileenLLL
opened
1 year ago
2
A question about searching time
#331
YiningWang2
opened
2 years ago
0
Potential database bug on pdb70_from_mmcif_220313.tar.gz, focusing on 6WOV_C
#330
ZiyaoLi
opened
2 years ago
0
ffindex_insert_memory: Bad address
#329
ndmaduro
closed
2 years ago
0
Issue with make & install
#328
ndmaduro
closed
2 years ago
3
Errors from hhsuitedb.py
#327
rcedgar
opened
2 years ago
0
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