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Right now, the current ImageJ settings (e.g., whether Edit>Options>ImageJ2 "Use SCIFIO when opening files" is ticked) impact the behavior of macros and scripts. This can cause very difficult-to-diagno…
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Hello,
I think the Action Bar plugin would be very usefull for tool sharing and testing via imageJ.js
it creates personnalized buttons that can run macros or beanshell scripts.
the bars can be …
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Hi
I am trying to run the DiameterJ Segment plugin using pyimagej.
After initialising the object, opening an image and converting the image to imageplus:
```ij = imagej.init()
image = ij.io().…
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As [discussed on IRC](http://code.imagej.net/chatlogs/imagejdev?times=prefix&start-date=2013-03-15&end-date=2013-03-15#20130315T163800), we should have a way for users to define macros or scripts to r…
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When executing ImageJ scripts, plugins or macros headlessly, it would be nice if the process could give a non-zero return code in case of error. Currently, ImageJ1 does not do this.
Added by @luxigo:…
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#142 nudged me to open this issue: ilastik users code around ilastik all the time. May it be shell/python/imagej scripts/macros for batch processing, or data preparation (e.g. conversion to h5) and pr…
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reprinting tasks from [this Zulip message](https://imagesc.zulipchat.com/#narrow/stream/329366-.5B2022-09.5D-Fiji.2BNGFF-Prague-hackathon/topic/stream.20events/near/287690127):
- [ ] *read* chunks …
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Hi all,
very nice project, I just noticed a minor issue with the text window used to open macro/scripts.
I could not type any text in a new text window open by the menu `File > New > Text Window`.
…
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Hey,
First thanks for your awesome plugin!
Some background: I'm trying to create a detection model for bone cells, in order to create an automated tool for cell counting. It will shorten the time pe…
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There is a worry that users might not be able to convert their serial macros into a parallel one.
We might assume template situations (like "process all files in a folder", or "I want to run tasks fr…