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The current state of the wrappers is that the last two columns are missing, so we need to investigate that.
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Hi,
I'm using the rCDK package and I'm getting the isotope pattern for a given molecular formula, but they have no labels as to what combination of isotopes each line belongs to.
Is there a way to g…
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Hello and thank you for this package.
I am trying to use this for isotope annotation in an unlabeled LC-HRMS metabolomics dataset (natural isotope patterns). However, some aspects of this are not …
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Hi,
I thought one other important aspect would be to compare two isotope pattern (e.g. one measured and one simulated) against each other. We could use the `matchedSpectra` here, assuming that the …
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As the title says, is it possible to calculate isotope patterns? Use data.frame to return the result for the user to view, of course he can choose to plot it out himself.
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Hi,
Thank you for the great package!
I'm trying to test it to generate possible molecules based on isotopic score.
min
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Define a function that helps identifying/subsetting a `Spectra` to extract the isotopes.
Have: one spectrum (i.e. a peak matrix with m/z and intensity values).
Want: indices of rows in the matrix …
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Hi,
I run massql tool (Commandline) to search for sulfur-containing signals with the following query:
QUERY scaninfo(MS1DATA) WHERE MS1MZ=X AND MS1MZ=X+1.996:TOLERANCEPPM=2
I'm attaching the une…
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See the galaxy output below.
> Loading required package: Rcpp
Joining, by = "peak"
Error in isotopeList[i, 3] get.formula -> .cdkFormula.createObject
In addition: Warning messages:
1: executin…