RECETOX galaxytools issues

RECETOX / galaxytools

Set of Galaxy tool wrappers developed at RECETOX

MIT License

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recetox-xmsannotator: redundancy filtering

#622 hechth opened 5 days ago
0
recetox-xmsannotator: compute confidence levels

#621 hechth opened 5 days ago
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recetox-xmsannotator: pathway matching

#620 hechth opened 5 days ago
0
recetox-xmsannotator: compute chemscore

#619 hechth opened 5 days ago
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recetox-xmsannotator: reformat annotation table and correlation matrix

#618 hechth opened 5 days ago
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recetox-xmsannotator: compute isotopes

#617 hechth opened 5 days ago
0
recetox-xmannotator: compute_rt_modules

#616 hechth opened 5 days ago
0
recetox-xmsannotator: compute_peak_modules

#615 hechth opened 5 days ago
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recetox-xmsannotator: compute_peak_correlations

#614 hechth opened 5 days ago
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reetox-xmsannotator: compute mass defect

#613 hechth opened 5 days ago
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recetox-xmsannotator: simple annotation

#612 hechth opened 5 days ago
0
qcxms: remove 'input in' files from neutral run output for each trajectory and use single file as input, as the file for each trajectory contains the same parameters anyway

#611 hechth opened 5 days ago
0
Adding new generation of table manipulation tools

#610 hechth opened 1 week ago
4
ms target screen: improve documentation

#609 hechth opened 1 week ago
0
scipy interpolate tool

#608 hechth opened 2 weeks ago
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Skyline transition list generation tool.

#607 hechth closed 1 week ago
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Updated mfassignr to version 1.1.2

#606 hechth closed 3 weeks ago
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rcx-aplcms version 0.13.4

#605 hechth closed 3 weeks ago
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recetox-aplcms: version update 0.13.4

#604 hechth closed 3 weeks ago
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mfassignr: version update 1.1.2

#603 hechth closed 3 weeks ago
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waveica: accept tables with additional columns

#602 hechth opened 3 weeks ago
0
Revert "Force input of rt correction in recetox-aplcms to be a collection"

#601 hechth closed 3 weeks ago
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recetox-aplcms: revert changes to correct time tool

#600 hechth closed 3 weeks ago
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isolib: added option to export to tabular

#599 hechth closed 3 weeks ago
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MS target screen: Id column in written as float instead of integer

#598 hechth opened 1 month ago
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MS target screen: accept tabulars as inputs for the peak tables

#597 hechth opened 1 month ago
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Force input of rt correction in recetox-aplcms to be a collection

#596 hechth closed 1 month ago
0
More parameters added to MFAssignR: MFAssignCHO and MFAssign function

#595 KristinaGomoryova closed 1 month ago
1
signal-to-noise separated into ratio and noise in IsoFiltR

#594 KristinaGomoryova closed 1 month ago
4
MFAssignR: re-implement the selection of most suitable recalibration series

#593 KristinaGomoryova closed 2 weeks ago
1
MFAssignR: include more parameters to MFAssign function

#592 KristinaGomoryova closed 1 month ago
0
MFAssignR: add more parameters to MFAssignCHO function

#590 KristinaGomoryova closed 1 month ago
0
MFAssignR: separate signal-to-noise input into ratio and noise in IsoFiltR

#588 KristinaGomoryova closed 1 month ago
1
added target screening tool

#587 hechth closed 1 month ago
0
Add tstep and etemp parameters to the QCxMS tool

#586 wverastegui closed 1 month ago
0
Add extra advanced qcxms parameters

#585 wverastegui closed 1 month ago
0
Updated recetox-aplcms to 0.13.3

#584 hechth closed 2 months ago
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update recetox-aplcms to 0.13.3

#583 hechth closed 2 months ago
0
hotfix for findrecalseries

#582 hechth closed 2 months ago
0
Galaxy wrapper for MFAssignR::FindRecalSeries tool

#581 KristinaGomoryova closed 2 months ago
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mfassignr: test for RecalList is failing

#580 KristinaGomoryova closed 2 months ago
0
waveica: accept tabular input files

#579 hechth opened 2 months ago
0
rcx-tk: add description and change label of output based on parameter etc.

#578 hechth opened 2 months ago
0
Replace all references to TSV to tabular when it comes to output files.

#577 hechth opened 2 months ago
0
MFAssignR: Recal function fails on MFAssignR model data in negative mode

#576 KristinaGomoryova closed 2 months ago
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retip: validate status of the Galaxy tools

#575 hechth opened 3 months ago
0
planemo test biocontainers for all subdirectories

#574 KristinaGomoryova closed 3 months ago
0
Fixed cut and mass parameters in mfassignr_snplot tool

#573 hechth closed 3 months ago
0
MFAssignR snplot cut value is not specified

#572 hechth closed 3 months ago
0
Script to run planemo test --biocontainers on all subdirectories in a directory

#571 KristinaGomoryova closed 3 months ago
0