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**Describe the bug**
This is a cross-reference of an existing bug already filed with scanpy developers, https://github.com/scverse/scanpy/issues/2969.
When I run scanpy on Windows 11 with the Leid…
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Unsupervised, it thinks there are many more than 8 populations.
cc @mandylr
``` r
library(scrunchy)
library(tidyverse)
#> Warning: package 'tibble' was built under R version 3.5.2
fsce
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Hi there,
It's come to my attention that while benchmarking against my own implementation of the Leiden community algorithm, which was merged into networkit a while ago, someone has found that it's a…
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This got published today: https://www.nature.com/articles/s41598-019-41695-z
A Java implementation is available at https://github.com/CWTSLeiden/networkanalysis.
I haven't looked at any of it in…
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**Memgraph version**
Memgraph2.16 and Memgraph2.17
**Environment**
Centos 7 x86 Docker image: memgraph/memgraph-mage
1T RAM.
cluster: 1 main + 2 replicas
**Describe the bug**
My te…
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**Describe the bug**
While running the leiden algorithm `rsc.tl.leiden(adata, key_added="leiden_res0_25", resolution=0.25` , I got a "CUDA error encountered 101 cudaErrorInvalidDevice invalid device …
Lem-P updated
6 months ago
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Hi Dr.Camargo:
I find this nice project when I read your IMG/VR v4 manuscripts published on Nucleic Acids Research. I have some doubts about this and hope you can help me about them.
1.I tried this…
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When dereplicating sequences, it is crucial to cluster genomes that significantly overlap each other (i.e., high bidirectional coverage) to avoid clustering sequences where one is entirely contained w…
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I recently stumbled across the paper: https://www.nature.com/articles/s41598-019-41695-z
**From Louvain to Leiden: guaranteeing well-connected communities**
V. A. Traag, L. Waltman & N. J. van E…
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## Expected Behavior
Leiden algorithm classifies a network that uses filters (Giant Component and a Partition attribute). This works fine for both Modularity and Gervain-Newman.
## Current B…