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### Is your feature request related to a problem? Please describe.
Improving semantics for internal speech processing is held back by maintaining add-on compatibility.
### Describe the solution yo…
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Hi Frank,
First of all congrats and thanks to share this great tool!
I've managed to run it on a small subset of our own patients. We usually test the immunogenicity of neoantigens as longer ep…
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When following a link that is no longer valid, a 404 page appears containing a search bar.
This search bar has relevant keywords from the URL pre-filled, however this behaviour is handled incorrectly…
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Hello,
I encountered an issue while running a script and would appreciate your help.
I need to generate longer token sequences, so I modified the **MAX_NUM_TOKENS** value in **include/flexflow/b…
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We no longer have OOM (at least for 10k sequences) as mentioned here: https://github.com/loculus-project/loculus/issues/2881#issue-2550791971 but load times are still unacceptably long if there are th…
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Is there already any implemented function to encode longer sequences (such as sequencing reads) using their k-mers embeddings?
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The `*matchPattern*` family of functions currently return as many matches as possible. However, sometimes you just want to know whether there is *any* match between two sequences, so it is inefficient…
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### Company Name
_No response_
### Use Cases or Problem Statement
In one of recent releases Snowflake decided that identity columns (and sequences) will no longer keep order by default. There is a …
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Just want to confirm my understanding is right.
In the evaluation of SOT performance of Elysium from `otb.py`:
https://github.com/Hon-Wong/Elysium/blob/5e6d14ed6939cde3cbffaba5424d5d929c38e492/eva…
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Hello,
I am using orthofinder to connect genes to do some cross species transcriptomic analysis.
When I dig into the results, some genes (from a single species/transcriptome) are represented in m…