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loculus-project
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loculus
An open-source software package to power microbial genomic databases
https://loculus.org
GNU Affero General Public License v3.0
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docs: add Plausible analytics
#3276
chaoran-chen
opened
41 minutes ago
0
Switch keycloakify PR to use Keycloak 26
#3275
corneliusroemer
opened
3 hours ago
0
Debug KC26 E2E issues
#3274
corneliusroemer
opened
4 hours ago
0
Edit account information button seems to use wrong target URL in local dev: https instead of http
#3273
corneliusroemer
opened
5 hours ago
0
upgrade to Keycloakify 11
#3272
fhennig
opened
14 hours ago
8
fix one bit of keycloakify issues
#3271
theosanderson
closed
13 hours ago
0
Upgrade to Keycloakify 11
#3270
fhennig
closed
14 hours ago
9
Review page takes 10+ seconds to load if there are 10k sequences to review
#3269
corneliusroemer
opened
1 day ago
3
We need to reduce the frequency at which we poll Github for curated data updates
#3268
corneliusroemer
opened
1 day ago
0
Backend log message is wrong, it doesn't mention all the extra filters that have been added to endpoint
#3267
corneliusroemer
opened
1 day ago
0
wip: Keycloak 26 (without keycloakify)
#3266
corneliusroemer
opened
1 day ago
1
chore(deps): upgrade keycloak to v25
#3265
corneliusroemer
opened
1 day ago
1
Upgrade to Keycloakify 11
#3264
fhennig
opened
1 day ago
0
Parse dates into ranges
#3263
corneliusroemer
opened
1 day ago
0
Create new field: `original_input_data` that doesn't need to conform to a consistent schema (because the input schema can change)
#3262
theosanderson
opened
1 day ago
4
Configure favicon of website
#3261
fengelniederhammer
opened
1 day ago
5
Decide what to do with openid-client v6: it's a total rewrite, expensive migration, wait and see?
#3260
corneliusroemer
opened
1 day ago
6
fix(backend): add foreign key to delete preprocessed data
#3259
chaoran-chen
opened
1 day ago
8
Delete-processed-tests
#3258
anna-parker
closed
1 day ago
2
feat(docs): update README with info on how to make db semi-persistent
#3257
anna-parker
closed
1 day ago
0
Don't merge: test ignore deleted
#3256
corneliusroemer
closed
2 days ago
0
feat(config): allow dev standin dbs to be semi-persistent through values.yaml
#3255
corneliusroemer
closed
2 days ago
3
Allow standin database to be made persistent through values.yaml
#3254
corneliusroemer
closed
2 days ago
0
fix(backend): ignore deleted sequences in processing pipeline updates
#3253
corneliusroemer
opened
2 days ago
0
fix(backend): delete processed entries as well when deleting unreleased sequence entries
#3252
corneliusroemer
opened
2 days ago
3
fix(backend): delete processed entries as well when deleting unreleased sequence entries
#3251
corneliusroemer
closed
2 days ago
0
When deleting unreleased sequence entries, the entry remains in processed data table blocking pipeline upgrades
#3250
corneliusroemer
opened
2 days ago
0
More useful log message when "Checking for newer processing pipeline versions"
#3249
corneliusroemer
opened
2 days ago
0
Add failing test for #3244
#3248
corneliusroemer
closed
2 days ago
0
chore(backend): fix some more racy backend tests by not asserting on exact order
#3247
corneliusroemer
closed
1 day ago
0
fix(backend): Fix submitter of revoked sequences to be the revoker
#3246
theosanderson
closed
1 day ago
6
backend config: consolidate external metadata into metadata
#3245
corneliusroemer
opened
2 days ago
0
Revoked sequences always have original submitter of the revoked version as the submitter, rather than the revoker
#3244
corneliusroemer
closed
1 day ago
3
Grammar error in error message: "Failed to revoke sequence entry: Accession versions are in not in one of the states"
#3243
corneliusroemer
opened
2 days ago
0
Flaky backend test with wrong assumptions about ordering
#3242
corneliusroemer
closed
1 day ago
1
sketch: do not hide metadata processing in sequence compression function
#3241
fengelniederhammer
closed
2 days ago
6
Delete processed data of no-longer-current pipeline versions after upgrade to save on storage
#3240
corneliusroemer
opened
2 days ago
1
Occasionally failing E2E test: `[webkit] › pages/search/index.spec.ts:45:5 › The search page › should search a few sequence entries by accession `
#3239
corneliusroemer
opened
2 days ago
0
Add "E2E" test that revises a sequence
#3238
corneliusroemer
opened
2 days ago
1
Do not merge: Test branch
#3237
anna-parker
closed
2 days ago
0
fix: links to the Loculus docs/homepage
#3236
chaoran-chen
closed
2 days ago
0
Flaky backend test
#3235
corneliusroemer
closed
2 days ago
0
chore(backend): fix flaky test that made wrong assumptions about order being guaranteed
#3234
corneliusroemer
closed
2 days ago
0
perf(backend): remove null values before storing processed data in database
#3233
corneliusroemer
closed
3 days ago
0
feat(backend): Don't store null fields of processed data for perf, emit exactly current schema in get-released-data - imputing with null
#3232
corneliusroemer
closed
1 day ago
7
chore(deps): bump the minor group across 1 directory with 18 updates
#3231
dependabot[bot]
closed
3 days ago
1
chore(deps): bump the minorandpatch group in /docs with 2 updates
#3230
dependabot[bot]
closed
3 days ago
0
feat(docs): small readme improvements
#3229
fhennig
closed
3 days ago
0
Rename GetDataToEdit endpoint to reflect that it now gets data for revision form too
#3228
theosanderson
opened
3 days ago
0
fix(backend): fix the inability to access revision form due to checking status
#3227
theosanderson
closed
3 days ago
5
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