-
We need to annotate manually-curated molecules with the following information:
- Target: mPro, Spike, ...
- Phenotypic Assay: 0 or 1
- Target Assay: 0 or 1
- Docking: 0 or 1
- IC50: value in uM…
-
## Expected Behavior
Summary: Running linclust or clust with a very big database leads to a heavy slowdown in the rescorediagonal part. Expected the job to continue much faster. It releases a warning…
-
Hi @yoshihikosuzuki ,
I am using ClassPro like this:
`$ ClassPro -v -T16 -NResults/13_profile_reads/Profile_17_mers -r7000 Results/11_preprocess_fastq/My_file.fastq.gz`
And get this output:
```
…
-
This text:
> This work is made possible by the open sharing of genetic data by research groups from all over the world. We gratefully acknowledge their contributions.
is added to any dataset on …
-
Hello, I have a hypermemory problem:
The error message is as follows:
==============================================================
[M::ha_hist_line] rest: ***************************************…
-
Dear @jrotieno,
Could I know how do you align HCoV sequence?
-
Dear developers of this great assembler,
I have a question concerning a weird k-mers histogram with 3 peaks for a definitely diploid fish genome. Please find the attached k-mers histogram as output…
-
## Expected Behaviour
Unknown
## Current Behaviour
I am trying to re-create the clustered nr database currently featured on the BLAST site. The cluster step appears to stall after merging the…
-
Thank you very much for providing such a useful tool!
I used simulated diploid potato data and ran classpro. I don't know why the program reported an error.
I used two potato haplotypes, the first…
-
I am trying to run a `foldseek easy-search` job with the UniProt database built from `foldseek databases Alphafold/UniProt`. With two different attempts on different machines (with up to 256GB memory)…