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I am running Trackmate on a dataset of live cells and it is combined dataset which contains raw phase-contrast miscroscopy data in one channel and its corresponding segmentaion in another channel appe…
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## Bug Report
### Describe the Bug
For the miscroscopy extension, when having a layout with N (with N> 1) views, it is not possibile to change the active view by clicking on the desidered view
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Punzo updated
6 months ago
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I got a suggestion from our scientist to rename the [photoemission microscopy](http://purl.org/pan-science/PaNET/PaNET01146) to photoelectron emission microscopy (PEEM).
Is it possible to modify th…
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Current situation: several python projects already exist, partially competing and partially complementary. For the most part we agree this is wasteful, that we could potentially do much more by workin…
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Currently the dicom-miscroscopy-viewer and SLIM use the Optical Path Identifier to handles channels, apply the color functions, etc... However the Optical Path Identifier could not be always unique, s…
Punzo updated
3 years ago
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from Steve: when zooming, sometimes some tiles are not rendered until there is another interaction (e.g. panning) and then they get rendered.
Punzo updated
3 years ago
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Need to better understand and document specific requirements for ROIs to use in segmentation development.
Tasks:
- [x] E-mail conversation with Michael and Saskia to clarify (and quantify) for ROIs
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https://github.com/MGHComputationalPathology/dicom-microscopy-viewer
See point (5) in MGHComputationalPathology/dicom-microscopy-viewer#47
Waiting Danny finishing this project:
https://github.c…
Punzo updated
3 years ago
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To support use from miscroscopy, microfluidics, etc., we should have the ability to import data from CSV rather than from FCS files.
This will include a need to interpret headers or else have heade…
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