trackmate-sc TrackMate issues

trackmate-sc / TrackMate

TrackMate is your buddy for your everyday tracking.

https://imagej.net/plugins/trackmate

GNU General Public License v3.0

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issues

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Manual typing of spot and track filtering values

#306 jpylvanainen opened 1 week ago
1
Tracks missing using capture overlay

#305 Rory235 opened 3 weeks ago
4
spot feature SNR definition

#304 asincerity closed 1 month ago
1
"Save" button triggers Exception

#303 jiyuuchc closed 2 months ago
0
Integrate LabKit in TrackMate to edit segmentation results

#302 tinevez opened 2 months ago
0
TrackMate StarDist custom model path error when using batcher

#301 jpylvanainen opened 3 months ago
2
Rework the CLI tools.

#300 tinevez closed 3 months ago
0
Utilities to simplify the integration of command-line tools in TrackMate modules

#299 tinevez closed 3 months ago
0
Be more tolerant when loading files with a missing spot.

#298 tinevez closed 2 months ago
0
Implemented KalmanTrackerFF for fast flows

#297 Lollum89 opened 4 months ago
0
Implemented KalmanTrackerFF for fast flows as a separate method

#296 Lollum89 opened 4 months ago
10
Tracking fast flows

#295 Lollum89 closed 4 months ago
2
A

#294 Lollum89 closed 4 months ago
0
Fix MATLAB functions - let them import ROIs from TrackMate >= v7

#293 tinevez closed 4 months ago
2
Trackmate is not loading properly

#292 Aneenamohan closed 2 months ago
4
More ways of assigning IDs to label when exporting label image

#291 tinevez closed 4 months ago
0
Export to CSV file in a headless mode

#290 tinevez closed 4 months ago
1
Fix error wrt changed API in imglib

#289 tpietzsch closed 1 month ago
0
Make a headless routine that can export a model to CSV file in one go.

#288 tinevez closed 4 months ago
0
the spot is filtered by a quality threshold

#287 asincerity closed 2 months ago
7
Ignore NaNs in images when computing intensity-related features.

#286 tinevez closed 6 months ago
0
added test cases

#285 meer1616 opened 6 months ago
0
Delete .idea directory

#284 tinevez closed 7 months ago
0
Refactoring for Improved Readability and Maintainability

#283 DivyankShah09 opened 10 months ago
0
Recommendations for plugins

#282 jiyuuchc closed 7 months ago
4
export table filename

#281 gletort closed 12 months ago
1
A 3D viewer for TrackMate based on the BVV.

#280 tinevez closed 1 year ago
0
Base the 3D mesh on the prototype imglib2-mesh library.

#279 tinevez closed 1 year ago
0
A Labkit launcher made to edit spots in the current frame or the whole movie

#278 tinevez closed 7 months ago
0
Create LAP tracker based on IoU instead of distance

#277 15bonte opened 1 year ago
3
Better shortcuts to navigate and edit tracking data.

#276 tinevez closed 1 year ago
0
NullPointerException on loading TrackMate .xml file, that exported by headless Groovy script

#275 hzqfox closed 1 year ago
3
Offer capturing overlay with a white background.

#274 tinevez closed 1 year ago
0
Cannot run MATLABExampleScript_1.m

#273 simonguld closed 1 year ago
1
Cannot run jython scripts Example_Script1.py and Example_Script3.py

#272 simonguld closed 1 year ago
4
Selecting only track links/edges

#271 msphan closed 1 year ago
2
Setting keys to navigate track from image

#270 msphan closed 1 year ago
0
Export label images on 32-bit float type.

#269 tinevez closed 6 months ago
9
Extending TrackMate for Omnipose

#268 marieanselmet closed 1 year ago
2
Possibility to have 32 bit label image ?

#267 lguerard closed 6 months ago
8
Spot is now an interface, with 3 derived class.

#266 tinevez closed 1 year ago
0
Support 3D segmentation by adding spots with triangular meshes.

#265 tinevez closed 1 year ago
0
Update to imglib2 6.1.0

#264 hinerm closed 1 year ago
0
Draft PR that targets the work done towards TrackMate v8.

#263 tinevez opened 1 year ago
0
Support 3D segmentation in TrackMate.

#262 tinevez closed 1 year ago
0
A tool to configure a sub-selection of feature analyzers.

#261 tinevez closed 1 year ago
0
No tracks detected with overlap tracker when first frame has no spot

#260 lxenard opened 1 year ago
0
Fix velocity in branch analysis. Add total distance travelled feature.

#259 gletort closed 1 year ago
0
Function for average spot intensity

#258 jbogomolovas2 closed 6 months ago
4
Matlab graph import script fails on results with segmentation

#257 anthonysantella closed 4 months ago
2