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Currently in https://github.com/OpenwaterHealth/OpenLIFU-python/issues/126, we are computing a default simulation grid full of water with [ref_params](https://github.com/OpenwaterHealth/OpenLIFU-pytho…
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@cookpa @ntustison
I am running cortical thickness extraction for Brain MRI images (a batch of 4000 MRI images) and encountered a segmentation fault during processing.
The script ran successful…
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I want to use this code to split the brain image, I want to enter a 2D slice and a 3D image, which part of the code should I change?
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### Title
Functional MRI Analysis of Connectivity and Network Dynamics of central fatigue in Multiple Sclerosis disease
### Leaders
Alberto Benelli
### Collaborators
_No response_
### Brainhack …
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Here is a copy of the notes I've compiled after our meeting and while thinking/reading on the topic. I put it here to help for our next meeting. Many pieces of the process are still unclear to me and …
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Use FSSurface with parcelation to create material segmentation of FSAverage scan to white matter, grey matter, CSF, skull, skin, air
FSaverage has brain segmentation, but it seems skin and skull …
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### Description of the problem
I try to compute BEM surfaces from a freshly recon-alled participant, but I get an error.
--------------------------------------------------------------------------…
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When I try to run auto segmentation using Slicer, it shows this error.
[2024-06-05 23:59:28,218] [27056] [MainThread] [ERROR] (uvicorn.error:434) - Exception in ASGI application
Traceback (most …
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**Describe the bug**
I am trying create and run my own `prostate_mri_lesion_seg_app`. For this, I am using data from the QIN-Prostate-Repeatability collection. I've modified the `app.py` file to corr…
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## Description
This issue will be used to regroup most/all the relevant methods used for vertebral labeling.
## Awesome list
| Method name | Link | Open source | Task | Region | Modality | De…