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Hi everyone,
just had the issue that CMake fails to build MRtrix3 dev branch on macOS due to an incorrect SDK path. CMake references the outdated macOS SDK MacOSX13.3.sdk on my system, which no lo…
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Hello!
I am aware of https://anaconda.org/mrtrix3/mrtrix3 but would you be interested to add a recipe to the Bioconda project ?
Recipes of many Bio** related projects at https://github.com/bioco…
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Hi @Lestropie
**Description**:
I encountered an error during the participant-level processing step using the MRtrix3 Connectome pipeline. The error suggests that the pipeline is unable to import t…
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Will be downstream of #2920.
Attempting a build of the latest `dev` on MSYS2, I get:
```
[5/503] Running utility command for LinkPythonCommandFiles
FAILED: python/mrtrix3/commands/CMakeFiles/L…
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Hi @DimuthuHemachandra! I just wanted to let you know that I updated the Nipype library in GiraffeTools and that you can now use all MRtrix3 functions (still within Nipype) instead of some old and dep…
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### Metadata
Epic: #17
### Description
Porting the MRtrix3 connectome BIDS app to Pydra with the help of Robert Smith
### Benefit Hypothesis
If the mrtrix3 connectom pipeline is ported t…
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Sorry for crossposting.
I am trying to install MRtrix3 Tissue but I have issues with qt5 opengl I guess.
(base) andraderenew@Renes-MacBook-Air MRtrix3Tissue % ./configure
MRtrix3Tissue build…
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Dear Dimitri,
thanks for providing the code for compiling the mrtrix3 surface-seeding fork! Unfortunately the solution in the documentation leads to an issue when trying to build the fork, leading…
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This story stems from this post
https://github.com/MRtrix3/mrtrix3/issues/2474
DWI registration (and subsequent transformation) to T1 space is an important step in connectomics. There are a number of…
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I'm running the following command:
docker run -i --rm \
-v ~/data/:/bids_dataset \
-v ~/out:/output \
bids/mrtrix3_connectome \
/bids_dataset /output preproc --session_la…