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The current mutational signature implementation uses continuous data. It would be very useful if we can turn the data into binary calls (present or not or NA). We can then select samples with certain …
jjgao updated
5 months ago
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- Put barchart in the top of the tooltip
- Significant Mutational Signatures -> Mutational Signatures? Or just list significant ones?
inodb updated
5 months ago
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- Mutational signatures pipeline https://github.com/cBioPortal/cbioportal/issues/6779
- Mutational Signatures in Comparison page
- Mutational Signatures in Study view
- Discrete mutational signatur…
jjgao updated
5 months ago
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We should have a pipeline to calculate mutational signatures for any MAF.
jjgao updated
3 years ago
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Shalabh will provide the current list of MS and also the threshold values
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@jjgao commented on [Fri Dec 22 2017](https://github.com/cBioPortal/GSoC/issues/40)
**Background**:
Signatures of mutational processes in human cancers can be inferred from somatic mutations data…
jjgao updated
3 years ago
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When loading multiple mutational signatures datasets with different extensions/versions (e.g. _v2, _extra, _early), the different versions show op to select. However, upon selection, the signatures th…
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It's important to see the correlation between different `Mutational Signatures` category, once we have binary `Mutational Signatures` data, we can finally make a correlation plot between binary `Mutat…
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For proper visualisation of mutational signatures, both a contribution and pvalue file is needed. At the moment, if these conditions are met for files with a V2 extension, the mutational signatures ta…
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collate_results uses the cached results table by default. This is good because it has preserved mutational signature data that has since gone away (namely the current mutational signature table omits …