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Hi,
I am trying to run ngsStats to get Ho and He for two maize subpopulations.
I keep running into 236622 Floating point exception(core dumped) issues.
I have been following this example: http…
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I tried to run telescope assign on one of my alignment files and get the following lines:
Traceback (most recent call last):
File "/users/PAS1143/osu8165/.conda/envs/telescope_env/bin/telescope"…
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running via singularity, the pipeline ends after hitting the following. looks as though this option was removed in an earlier commit - is this reflected in the current docker version? thanks!!
```
…
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Dear support!
Since NetworkX 2.3 requires Python 3.5+ (https://networkx.github.io/documentation/stable/install.html) && Ragout uses Python 2.7 it's impossible to run Ragout (or install via conda) w…
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Greetings,
I've been using gatb-minima-pipeline for a while now for a de novo assembly software benchmark, available at [Github](https://github.com/cimendes/LMAS). I've been running it so far witho…
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Just ran metaerg on the included example files to try to get a sense of what a normal output looks like, but when it got to the outputreports step it threw up an error. It also seems to be having an i…
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Hi. Interesting approach, thanks !
Just trying the docker approach, I'm gettng the following issues.
My system Ubuntu 1604,
Perl 5.22
docker pull xiaolidong/docker-metaerg
### does not fi…
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Hi all
Maybe this does not belong here but I just realised that I am always creating new geno files every time I do some analysis.
I was thinking that if I have a large geno file (a chromosome) I wo…
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Hi, Filipe,
I am using ngsF to estimate the inbreeding coefficient for a population of giraffes. I am not sure about the parameter "--freq_fixed". The readMe stated "assume initial MAF as fixed pa…
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Hello, I get an error when making ngs-tools: fatal error: ngs/ncbi/NGS.hpp: No such file or directory
Here is my make output. Where can I find NGS.hpp?
make
cd /root/ncbi-outdir/ngs-tools/linux…