-
_From @richelbilderbeek on July 25, 2016 13:50_
For the full pipeline, I now simulate two alignments per species tree, resulting in at least two nLTT statistic distributions. Check using statistics i…
-
* [x] Measure n_taxa [n_taxa.zip](https://github.com/richelbilderbeek/wiritttea/files/769371/n_taxa.zip)
* [x] Add n_taxa to data set
* [x] Measure ESS: fails, first takes hours for one file, the…
-
**Submitting author:** @wrightaprilm (April Wright)
**Repository:** https://github.com/wrightaprilm/treesiftr
**Version:** v1.0.0
**Editor:** @juanklopper
**Reviewer:** @ethanwhite, @rachelss
**Archiv…
-
Copy-paste of email below:
> Fwd: Methods in Ecology and Evolution - Decision on Manuscript ID MEE-19-08-613
>
> 29 October 2019 11:15 42 KB
> From: Giovanni Laudanno
> To: Rampal S. Etienne, R…
-
Depends on:
* [x] Add `pirouette::create_dd_tree`: [https://github.com/richelbilderbeek/pirouette/issues/383](https://github.com/richelbilderbeek/pirouette/issues/383)
* [x] Script to run one ex…
-
Context, copied from response letter:
> * 6. My final point that would require some more work is in fact noted by
> the authors themselves, namely that “one tree is not enough to determine
> …
-
Currently, file naming is like this:
Filename|Description
-------------|---------------------------------------
`parameters.RDa`|the parameter file
[TODO]`mbd.tree`|the true MBD tree
`mbd.fasta…
-
Dear Bio++,
For a scientific problem, me and my students developed classes `LTT` (lineages through time) and `nLTT` (normalized LTT) and unit tests, with the goal of using the nLTT statistic (from …
-
Are we still using @rmcclosk 's thread safe functionality?
-
I was in the middle of writing unit tests but I don't think it's complete yet.