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**Operation name:** < multiomics data integration >
**Short description:** < Integrate or combine multiple omics data of same or different type >
**Parent URI(s):** < http://edamontology.org/to…
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We should make the usage of datasets more heterogenous across the notebooks in the docs.
Practically:
- [ ] select 1, max 3, small datasets (
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I really like your method. I would like to use it on my dataset. I have multi omics data in four different csv files. . From paper, its clear xi are generated as: pool all the feature in one matrix
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Hi @rargelaguet ,
I am using MOFA2 on bulk omics data integration. I would like to test how well it generalizes on unseen datasets.
I wanted to make sure if I am doing it properly and get any com…
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In the following issue #671 we discussed the major changes for SDRF specification during the next release 1.1. One of them, is the extension of SDRF for metabolomics.
> **GOAL**: The aim of adapti…
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Hello,
It is a question not related to git but most to the algorithm of MSNE.
You mention that MSNE is not comparing the edge weights between different networks, but this is important no?
What is…
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Hi,
I found the list missed some recent papers:
>[Multimodal Integration] [2022 Nature Biotechnology] Multi-omics single-cell data integration and regulatory inference with graph-linked embedding
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To generate the plot after the TSNE you are proposing this code:
![image](https://github.com/xuxiaohan/MSNE/assets/74925521/97b0c7a7-a873-4664-987b-b1f8d2275b5b)
But i am not sure what is the vari…
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There will be other feature requests for genomic support, but I believe this is a fundamental first step.
Please feel free to give your own input or suggest something entirely different!
Scenario:…
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Please make the omics section more attractive. Is there anything from Biomax, we can use here. Please also assign this to anybody else, who might be relevant.