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In order to allow lossless compression, insertions need to be included in the Maple format.
I could find this edge case specified in the preprint.
It's easy to do, one just needs to agree to a conve…
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here's a draft of the "workflow" diagram - I haven't put in things for the output yet, though? (or figured out a better label than "insights" for that one arrow =) This is the inkscape SVG; feel free…
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How can I store phylogenetic trees in my anndata file object?
Here's the code:
```py
import gzip, requests
import anndata as an
import ete3
from Bio.SeqIO.FastaIO import SimpleFastaParser
…
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Hi all - I am having a permissions issue running some analyses on arbor.kitware.com. I know you all are working on some of this stuff so forgive me if this is a transient issue.
I have been working o…
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Not sure if this is an issue with R 4.0.0 but i cannot install this package anymore. This is preventing ggimage package from working...
> * installing *source* package ‘rsvg’ ...
> ** package ‘rsv…
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Hi All, here is a problem related to the 'good way to use password' for ssh saga connexions.
I store in database saga adaptors parameters, saga Service and Context are initialied in a class instant…
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I think my package managers are all fouled up on my home Mac. I can install and run my modified code on my remote workstation running Ubuntu, but the executable is not being updated on my Mac.
```co…
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I found issue #521 but none of the tips there helped in my case.
I am trying to run bactopia on WSL + Ubuntu, fresh install. Installed MambaForge as per the installation instructions, then installed …
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Here's a draft GitHub issue summary that could excite people about the "Gödel Golem" self-bootstrapping AI concept:
**Title: The Gödel Golem - A Novel Path Toward Self-Bootstrapping AGI**
Throughout…