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Re: https://github.com/PhysiCell-Tools/PhysiCell-Studio/blob/main/examples/anim_cells_tracks.py
Line 211: `fname = "snapshot%08d.svg" % current_idx`
"snapshot*.svg" files are missing from this repo…
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I get a `Segmentation fault (core dumped)`, if I try to generate a second instance of a Cell_Definition.
Reading up on this, this potentially points to a memory leaking.
Minimal example:
1. res…
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Hello,
I am trying to build using NVIDIA C++ Compiler `nvc++` version 24.5
```
CC := nvc++
CFLAGS := -O3 -fomit-frame-pointer -mp -std=c++11
```
It complains with the following error(s):
`…
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Hey @IGGoncalves!
Just found PhysiCOOL and it seems super nice. Any plans to update the API according to the changes in the current PhysiCell version? It would be great if we could modify the initi…
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the Makefile `reset` function relies on a `PhysiCell_settings-backup.xml` file.
the problem is that not all sample project generate a`PhysiCell_settings-backup.xml`.
the bigger problem is that Mak…
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For downstream analysis, it would often be good to know what the actual data type from a column for the output matrix is.
In PhysiCell everything is outputted as float (double).
The suggestion is …
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https://github.com/MathCancer/PhysiCell/blob/master/core/PhysiCell_rules.cpp#L2356
setup_cell_rules() is calling export_rules_csv_v1( rules_file );
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- [ ] IMPORTANT! Verify the default params for a New cell type match those in the C++ code
- [x] for rates|durations: after parsing rates in .xml, compute duration; and vice-versa
- [x] for rates|du…
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I'd welcome a discussion about this issue. In the C++ custom.cpp, create_cell_types(), we define cell types' `functions`. But this assumes those cell types (beyond `cell_defaults`) have been defined, …
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I have been unable to compile PhysiCell on my MacBookPro
After make ANY-PROJECT > make, I obtain this error:
ld: symbol(s) not found for architecture arm64
clang-16: error: linker command failed …