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**Addition of Algorithm:**
My name is Matthew Marino. I am a CFDE GlyGEN summer intern working under Jeet Vora and Rene Ranzinger. I am currently trying to create multiomics workflows starting with…
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A next step for Unipept is adding support for a functional analysis next to the existing taxonomic analysis. While the problem sounds similar to the taxonomic one, there are a few problems:
* Avail…
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On Wed, Aug 30, 2017 at 11:10 PM, Nuno Bandeira wrote:
Hi Raja,
It was great to touch base today - I'm attaching the [Nature Biotech paper](https://www.ncbi.nlm.nih.gov/pubmed/27504778) I menti…
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Hi!
When using foldcomp compress on this file: https://raw.githubusercontent.com/nf-core/test-datasets/modules/data/proteomics/pdb/1tim.pdb
it breaks into 4 parts: 1tim.pdbA_0.fcz, 1tim.pdbA_1.fcz…
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Hi,
The hyperlink option 'Filter by genes in paper' in the top banner, underneath project description, does not work for proteomics datasets.
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Is there an existing MI for proteomics data that we can assess resolute against? Goal is to provide a wish list metadata for upcoming datasets
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Hi Guangchuang,
Maybe something to add/link to in your book: https://support.bioconductor.org/p/p134523/#p134554 ?
It links to some example code on how to use `clusterProfiler` for analysis of prote…
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Many papers on mass-spectrometry based proteomics have shown the use of deep learning for intensity prediction, combining scores across search algorithms, retention time, collision corss section predi…
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The MC2 Center data model does not currently enable assay-specific metadata to be recorded. Adding these models is a critical part of supporting data sharing and reuse. Potential models to add were or…
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Hi,
Could the protein abundance values shown in the ‘Results’ tab for DDA (Data Dependent Analysis) proteomics baseline experiments include **ppb** (parts per billion) as the unit displayed next to…