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Hi again
I'm truing to run reprDB in my standalone OSX, and i don't have what it needs to execute qsub command. i tried searching online and the installation of Torque seems pretty challenging for me…
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### Bug Description
qsub_build.sh uses install.dependencies.R which is no longer there, It should use install_pecan.sh instead as I thought
https://github.com/PecanProject/pecan/blob/develop/scr…
Waer1 updated
1 month ago
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Both SGE and LSF have qsub options that cause the qsub command to wait until the job has completed before returning. Some 3rd party pipeline applications make use of this feature, which makes porting…
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Dear Team
I have installed the necessary dependencies to run the OptMAVEn_2.0 code in a separate conda environment. When running the OptMAVEn_2.0 code as instructed, I get the following error:
`…
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I'm having trouble getting call caching to work with Singularity and SGE, and I'm wondering if anyone has a working example config or some pointers. My config is below, minus passwords and specific pa…
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```
What steps will reproduce the problem?
1. setup qsub so that there is a queue problem
2. submit job
3. job constantly resubmits over and over and fails.
What is the expected output? What do you s…
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### Summary
We should add a template for `qsub` commands that users can edit for the package to work on their clusters.
### Additional Detail
`qsub` commands are not identical for all HPC…
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The scc can send email notifications
* Use “-m” qsub option
- b = when job begins,
- a = if job aborts
- e = when job ends
eg
`qsub -P project -m bae spline.qsub`
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### Command description
Firstly, apologies if this is not the most suitable issue type.
I noticed that ``qstat`` or ``qsub`` pages refer to TORQUE scheduler. However, other schedulers, at least SGE …
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Check qsub is working in validation